Journal: IEEE/ACM Trans. Comput. Biology Bioinform.

Volume 3, Issue 2

97 -- 0Dan Gusfield. Introduction of New Associate Editors
98 -- 113Wei Chu, Zoubin Ghahramani, Alexei Podtelezhnikov, David L. Wild. Bayesian Segmental Models with Multiple Sequence Alignment Profiles for Protein Secondary Structure and Contact Map Prediction
114 -- 125Samuel A. Danziger, Sanjay Joshua Swamidass, Jue Zeng, Lawrence R. Dearth, Qiang Lu, Jonathan H. Chen, Jianlin Cheng, Vinh P. Hoang, Hiroto Saigo, Ray Luo, Pierre Baldi, Rainer K. Brachmann, Richard H. Lathrop. Functional Census of Mutation Sequence Spaces: The Example of p53 Cancer Rescue Mutants
126 -- 140Alexandra M. Carvalho, Ana T. Freitas, Arlindo L. Oliveira, Marie-France Sagot. An Efficient Algorithm for the Identification of Structured Motifs in DNA Promoter Sequences
141 -- 154Daniel G. Brown, Ian M. Harrower. Integer Programming Approaches to Haplotype Inference by Pure Parsimony
155 -- 164Marc Vass, Clifford A. Shaffer, Naren Ramakrishnan, Layne T. Watson, John J. Tyson. The JigCell Model Builder: A Spreadsheet Interface for Creating Biochemical Reaction Network Models
165 -- 173Duhong Chen, Oliver Eulenstein, David Fernández-Baca, Michael Sanderson. Minimum-Flip Supertrees: Complexity and Algorithms
174 -- 185Petteri Sevon, Hannu Toivonen, Vesa Ollikainen. TreeDT: Tree Pattern Mining for Gene Mapping
186 -- 191Yun S. Song. A Concise Necessary and Sufficient Condition for the Existence of a Galled-Tree