| 1153 | -- | 1169 | Dongxiao Zhu, Lipi R. Acharya, Hui Zhang. A Generalized Multivariate Approach to Pattern Discovery from Replicated and Incomplete Genome-Wide Measurements |
| 1170 | -- | 1182 | Rui Chang, Robert Shoemaker, Wei Wang. A Novel Knowledge-Driven Systems Biology Approach for Phenotype Prediction upon Genetic Intervention |
| 1183 | -- | 1195 | Ekhine Irurozki, Borja Calvo, José Antonio Lozano. A Preprocessing Procedure for Haplotype Inference by Pure Parsimony |
| 1196 | -- | 1207 | Simone Battagliero, Giuseppe Puglia, Saverio Vicario, Francesco Rubino, Gaetano Scioscia, Pietro Leo. An Efficient Algorithm for Approximating Geodesic Distances in Tree Space |
| 1208 | -- | 1222 | David J. John, Jacquelyn S. Fetrow, James L. Norris. Continuous Cotemporal Probabilistic Modeling of Systems Biology Networks from Sparse Data |
| 1223 | -- | 1234 | Carito Guziolowski, Sylvain Blachon, Tatiana Baumuratova, Gautier Stoll, Ovidiu Radulescu, Anne Siegel. Designing Logical Rules to Model the Response of Biomolecular Networks with Complex Interactions: An Application to Cancer Modeling |
| 1235 | -- | 1246 | Sitanshu Sekhar Sahu, Ganapati Panda. Efficient Localization of Hot Spots in Proteins Using a Novel S-Transform Based Filtering Approach |
| 1247 | -- | 1257 | Samuel Coulbourn Flores, Michael Sherman, Christopher M. Bruns, Peter Eastman, Russ B. Altman. Fast Flexible Modeling of RNA Structure Using Internal Coordinates |
| 1258 | -- | 1272 | Biing-Feng Wang, Chien-Hsin Lin. Improved Algorithms for Finding Gene Teams and Constructing Gene Team Trees |
| 1273 | -- | 1282 | Chun-Hou Zheng, Lei Zhang, To-Yee Ng, Chi Keung Shiu, De-Shuang Huang. Metasample-Based Sparse Representation for Tumor Classification |
| 1283 | -- | 1295 | Qian Peng, Andrew D. Smith. Multiple Sequence Assembly from Reads Alignable to a Common Reference Genome |
| 1296 | -- | 1308 | Nadja Betzler, René van Bevern, Michael R. Fellows, Christian Komusiewicz, Rolf Niedermeier. Parameterized Algorithmics for Finding Connected Motifs in Biological Networks |
| 1309 | -- | 1317 | Jong Kyoung Kim, Seungjin Choi. Probabilistic Models for Semisupervised Discriminative Motif Discovery in DNA Sequences |
| 1318 | -- | 1329 | Pedro Feijão, João Meidanis. SCJ: A Breakpoint-Like Distance that Simplifies Several Rearrangement Problems |
| 1330 | -- | 1343 | Marco Mernberger, Gerhard Klebe, Eyke Hüllermeier. SEGA: Semiglobal Graph Alignment for Structure-Based Protein Comparison |
| 1344 | -- | 1357 | Peter Boyen, Dries Van Dyck, Frank Neven, Roeland C. H. J. van Ham, Aalt D. J. van Dijk. SLIDER: A Generic Metaheuristic for the Discovery of Correlated Motifs in Protein-Protein Interaction Networks |
| 1358 | -- | 1372 | Harry Buhrman, Peter T. S. van der Gulik, Steven Kelk, Wouter M. Koolen, Leen Stougie. Some Mathematical Refinements Concerning Error Minimization in the Genetic Code |
| 1373 | -- | 1384 | William W. L. Wong, Forbes J. Burkowski. Using Kernel Alignment to Select Features of Molecular Descriptors in a QSAR Study |
| 1385 | -- | 1392 | Marco Muselli, Alberto Bertoni, Marco Frasca, Alessandro Beghini, Francesca Ruffino, Giorgio Valentini. A Mathematical Model for the Validation of Gene Selection Methods |
| 1393 | -- | 1399 | Elena Dubrova, Maxim Teslenko. A SAT-Based Algorithm for Finding Attractors in Synchronous Boolean Networks |
| 1400 | -- | 1410 | Zhi-Zhong Chen, Lusheng Wang. Fast Exact Algorithms for the Closest String and Substring Problems with Application to the Planted (L, d)-Motif Model |
| 1411 | -- | 1416 | Simona Grusea. On the Distribution of the Number of Cycles in the Breakpoint Graph of a Random Signed Permutation |
| 1417 | -- | 1424 | Getachew K. Befekadu, Mahlet G. Tadesse, Tsung-Heng Tsai, Habtom W. Ressom. Probabilistic Mixture Regression Models for Alignment of LC-MS Data |
| 1425 | -- | 1430 | Paolo Magni, Angela Simeone, Sandra Healy, Antonella Isacchi, Roberta Bosotti. Summarizing Probe Intensities of Affymetrix GeneChip 3 Expression Arrays Taking into Account Day-to-Day Variability |
| 1431 | -- | 1437 | Ehud Aharoni, Hani Neuvirth, Saharon Rosset. The Quality Preserving Database: A Computational Framework for Encouraging Collaboration, Enhancing Power and Controlling False Discovery |