Parallelizing the Smith-Waterman Algorithm Using OpenSHMEM and MPI-3 One-Sided Interfaces

Matthew Baker, Aaron Welch, Manjunath Gorentla Venkata. Parallelizing the Smith-Waterman Algorithm Using OpenSHMEM and MPI-3 One-Sided Interfaces. In Manjunath Gorentla Venkata, Pavel Shamis, Neena Imam, M. Graham Lopez, editors, OpenSHMEM and Related Technologies. Experiences, Implementations, and Technologies - Second Workshop, OpenSHMEM 2015, Annapolis, MD, USA, August 4-6, 2015. Revised Selected Papers. Volume 9397 of Lecture Notes in Computer Science, pages 178-191, Springer, 2015. [doi]

@inproceedings{BakerWV15,
  title = {Parallelizing the Smith-Waterman Algorithm Using OpenSHMEM and MPI-3 One-Sided Interfaces},
  author = {Matthew Baker and Aaron Welch and Manjunath Gorentla Venkata},
  year = {2015},
  doi = {10.1007/978-3-319-26428-8_12},
  url = {http://dx.doi.org/10.1007/978-3-319-26428-8_12},
  researchr = {https://researchr.org/publication/BakerWV15},
  cites = {0},
  citedby = {0},
  pages = {178-191},
  booktitle = {OpenSHMEM and Related Technologies. Experiences, Implementations, and Technologies - Second Workshop, OpenSHMEM 2015, Annapolis, MD, USA, August 4-6, 2015. Revised Selected Papers},
  editor = {Manjunath Gorentla Venkata and Pavel Shamis and Neena Imam and M. Graham Lopez},
  volume = {9397},
  series = {Lecture Notes in Computer Science},
  publisher = {Springer},
  isbn = {978-3-319-26427-1},
}