Parallelizing the Smith-Waterman Algorithm Using OpenSHMEM and MPI-3 One-Sided Interfaces

Matthew Baker, Aaron Welch, Manjunath Gorentla Venkata. Parallelizing the Smith-Waterman Algorithm Using OpenSHMEM and MPI-3 One-Sided Interfaces. In Manjunath Gorentla Venkata, Pavel Shamis, Neena Imam, M. Graham Lopez, editors, OpenSHMEM and Related Technologies. Experiences, Implementations, and Technologies - Second Workshop, OpenSHMEM 2015, Annapolis, MD, USA, August 4-6, 2015. Revised Selected Papers. Volume 9397 of Lecture Notes in Computer Science, pages 178-191, Springer, 2015. [doi]

Abstract

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