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GenDP: A Framework of Dynamic Programming Acceleration for Genome Sequencing Analysis

Yufeng Gu, Arun Subramaniyan 0001, Timothy Dunn, Alireza Khadem, Kuan-Yu Chen 0001, Somnath Paul, Mohammad Vasimuddin, Sanchit Misra, David T. Blaauw, Satish Narayanasamy, Reetuparna Das. GenDP: A Framework of Dynamic Programming Acceleration for Genome Sequencing Analysis. Communications of the ACM, 68(05):81-90, May 2025. [doi]

Authors

Yufeng Gu

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Arun Subramaniyan 0001

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Timothy Dunn

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Alireza Khadem

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Kuan-Yu Chen 0001

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Somnath Paul

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Mohammad Vasimuddin

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Sanchit Misra

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David T. Blaauw

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Satish Narayanasamy

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Reetuparna Das

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