GenDP: A Framework of Dynamic Programming Acceleration for Genome Sequencing Analysis

Yufeng Gu, Arun Subramaniyan 0001, Timothy Dunn, Alireza Khadem, Kuan-Yu Chen 0001, Somnath Paul, Mohammad Vasimuddin, Sanchit Misra, David T. Blaauw, Satish Narayanasamy, Reetuparna Das. GenDP: A Framework of Dynamic Programming Acceleration for Genome Sequencing Analysis. Communications of the ACM, 68(05):81-90, May 2025. [doi]

@article{GuSDKCPVMBND25,
  title = {GenDP: A Framework of Dynamic Programming Acceleration for Genome Sequencing Analysis},
  author = {Yufeng Gu and Arun Subramaniyan 0001 and Timothy Dunn and Alireza Khadem and Kuan-Yu Chen 0001 and Somnath Paul and Mohammad Vasimuddin and Sanchit Misra and David T. Blaauw and Satish Narayanasamy and Reetuparna Das},
  year = {2025},
  month = {May},
  doi = {10.1145/3712168},
  url = {https://doi.org/10.1145/3712168},
  researchr = {https://researchr.org/publication/GuSDKCPVMBND25},
  cites = {0},
  citedby = {0},
  journal = {Communications of the ACM},
  volume = {68},
  number = {05},
  pages = {81-90},
}