Preliminary results in accelerating profile HMM search on FPGAs - researchr publication related

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Arpith C. Jacob, Joseph M. Lancaster, Jeremy D. Buhler, Roger D. Chamberlain. Preliminary results in accelerating profile HMM search on FPGAs. In 21th International Parallel and Distributed Processing Symposium (IPDPS 2007), Proceedings, 26-30 March 2007, Long Beach, California, USA. pages 1-8, IEEE, 2007. [doi]

The following publications are possibly variants of this publication:

Designing patterns for profile HMM searchYanni Sun, Jeremy Buhler. bioinformatics, 23(2):42-43, 2007. [doi]

Designing Patterns and Profiles for Faster HMM SearchYanni Sun, Jeremy Buhler. tcbb, 6(2):232-243, 2009. [doi]

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