Reconstructing Qwen3 into Qwen3-Protein: A Versatile Biophysics-Grounded Protein Language Foundation Model for PTMs and Downstream Tasks

Yiyu Lin, Sen Yang 0017, Jiahui Wu, Huaiyang Sun, Hao Wu, Lun Zhu, Yan Wang. Reconstructing Qwen3 into Qwen3-Protein: A Versatile Biophysics-Grounded Protein Language Foundation Model for PTMs and Downstream Tasks. In Xuefeng Cui, Xiujuan Lei, Yuri Porozov, editors, Bioinformatics Research and Applications - 22nd International Symposium, ISBRA 2026, Macao, China, July 22-24, 2026, Proceedings, Part I. Volume 16690 of Lecture Notes in Computer Science, pages 247-260, Springer, 2026. [doi]

Authors

Yiyu Lin

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Sen Yang 0017

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Jiahui Wu

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Huaiyang Sun

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Hao Wu

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Lun Zhu

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Yan Wang

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