AGAThA: Fast and Efficient GPU Acceleration of Guided Sequence Alignment for Long Read Mapping

Seongyeon Park, JungUk Hong, Jaeyong Song, Hajin Kim, Youngsok Kim, Jinho Lee. AGAThA: Fast and Efficient GPU Acceleration of Guided Sequence Alignment for Long Read Mapping. In Michel Steuwer, I-Ting Angelina Lee, Milind Chabbi, editors, Proceedings of the 29th ACM SIGPLAN Annual Symposium on Principles and Practice of Parallel Programming, PPoPP 2024, Edinburgh, United Kingdom, March 2-6, 2024. pages 431-444, ACM, 2024. [doi]

Abstract

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