Optimization of Therapeutic proteins to Delete T-Cell epitopes while Maintaining Beneficial Residue Interactions - researchr publication related

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Andrew S. Parker, Karl E. Griswold, Chris Bailey-Kellogg. Optimization of Therapeutic proteins to Delete T-Cell epitopes while Maintaining Beneficial Residue Interactions. J. Bioinformatics and Computational Biology, 9(2):207-229, 2011. [doi]

The following publications are possibly variants of this publication:

Optimization algorithms for functional deimmunization of therapeutic proteinsAndrew S. Parker, Wei Zheng, Karl E. Griswold, Chris Bailey-Kellogg. bmcbi, 11:180, 2010. [doi]

Hypergraph Model of Multi-Residue Interactions in Proteins: Sequentially-Constrained Partitioning Algorithms for Optimization of Site-Directed Protein RecombinationXiaoduan Ye, Alan M. Friedman, Chris Bailey-Kellogg. jcb, 14(6):777-790, 2007. [doi]

Hypergraph Model of Multi-residue Interactions in Proteins: Sequentially-Constrained Partitioning Algorithms for Optimization of Site-Directed Protein RecombinationXiaoduan Ye, Alan M. Friedman, Chris Bailey-Kellogg. recomb 2006: 15-29 [doi]

Structure-based redesign of proteins for minimal T-cell epitope contentYoonjoo Choi, Karl E. Griswold, Chris Bailey-Kellogg. jcc, 34(10):879-891, 2013. [doi]

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