scPipe: A flexible R/Bioconductor preprocessing pipeline for single-cell RNA-sequencing data

Luyi Tian, Shian Su, Xueyi Dong, Daniela Amann-Zalcenstein, Christine Biben, Azadeh Seidi, Douglas J. Hilton, Shalin H. Naik, Matthew E. Ritchie. scPipe: A flexible R/Bioconductor preprocessing pipeline for single-cell RNA-sequencing data. PLoS Computational Biology, 14(8), 2018. [doi]

@article{TianSDABSHNR18,
  title = {scPipe: A flexible R/Bioconductor preprocessing pipeline for single-cell RNA-sequencing data},
  author = {Luyi Tian and Shian Su and Xueyi Dong and Daniela Amann-Zalcenstein and Christine Biben and Azadeh Seidi and Douglas J. Hilton and Shalin H. Naik and Matthew E. Ritchie},
  year = {2018},
  doi = {10.1371/journal.pcbi.1006361},
  url = {https://doi.org/10.1371/journal.pcbi.1006361},
  researchr = {https://researchr.org/publication/TianSDABSHNR18},
  cites = {0},
  citedby = {0},
  journal = {PLoS Computational Biology},
  volume = {14},
  number = {8},
}