- Magdalena Kozielska, Franz J. Weissing. A neural network model for the evolution of learning in changing environments. PLoS Computational Biology, 20(1), January 2024.
- Ian T. Ellwood. Short-term Hebbian learning can implement transformer-like attention. PLoS Computational Biology, 20(1), January 2024.
- Kaiser J. Loell, Ryan Z. Friedman, Connie A. Myers, Joseph C. Corbo, Barak A. Cohen, Michael A. White. Transcription factor interactions explain the context-dependent activity of CRX binding sites. PLoS Computational Biology, 20(1), January 2024.
- Juliette Cooke, Maxime Delmas, Cecilia Wieder, Pablo Rodríguez-Mier, Clément Frainay, Florence Vinson, Timothy M. D. Ebbels, Nathalie Poupin, Fabien Jourdan. Genome scale metabolic network modelling for metabolic profile predictions. PLoS Computational Biology, 20(2), February 2024.
- Quintessa Hay, Christopher Grubb, Sarah Minucci, Michael S. Valentine, Jennifer Van Mullekom, Rebecca L. Heise, Angela M. Reynolds. Age-dependent ventilator-induced lung injury: Mathematical modeling, experimental data, and statistical analysis. PLoS Computational Biology, 20(2), February 2024.
- Carlos S. N. Brito, Wulfram Gerstner. Learning what matters: Synaptic plasticity with invariance to second-order input correlations. PLoS Computational Biology, 20(2), February 2024.
- Jiao Zhao, Ke Chen, Bernhard O. Palsson, Laurence Yang. StressME: Unified computing framework of Escherichia coli metabolism, gene expression, and stress responses. PLoS Computational Biology, 20(2), February 2024.
- Hong An, J. Chris Pires, Gavin C. Conant. Gene expression bias between the subgenomes of allopolyploid hybrids is an emergent property of the kinetics of expression. PLoS Computational Biology, 20(1), January 2024.
- Jakub Köry, Vedang Narain, Bernadette J. Stolz, Jakob Kaeppler, Bostjan Markelc, Ruth J. Muschel, Philip K. Maini, Joe Pitt-Francis, Helen M. Byrne. Enhanced perfusion following exposure to radiotherapy: A theoretical investigation. PLoS Computational Biology, 20(2), February 2024.
- SangJeong Lee, Hyunwoo Kim. Bidirectional de novo peptide sequencing using a transformer model. PLoS Computational Biology, 20(2), February 2024.