Abstract is missing.
- Effect of Using Varying Negative Examples in Transcription Factor Binding Site PredictionsFaisal Rezwan, Yi Sun, Neil Davey, Rod Adams, Alistair G. Rust, Mark Robinson. 1-12 [doi]
- A New Evolutionary Gene Regulatory Network Reverse Engineering ToolAntonella Farinaccio, Leonardo Vanneschi, Paolo Provero, Giancarlo Mauri, Mario Giacobini. 13-24 [doi]
- ML-Consensus: A General Consensus Model for Variable-Length Transcription Factor Binding SitesSaad Quader, Nathan Snyder, Kevin Su, Ericka Mochan, Chun-Hsi Huang. 25-36 [doi]
- Applying Linear Models to Learn Regulation Programs in a Transcription Regulatory Module NetworkJianlong Qi, Tom Michoel, Gregory Butler. 37-47 [doi]
- ATHENA Optimization: The Effect of Initial Parameter Settings across Different Genetic ModelsEmily Rose Holzinger, Scott M. Dudek, Eric Torstenson, Marylyn D. Ritchie. 48-58 [doi]
- Validating a Threshold-Based Boolean Model of Regulatory Networks on a Biological OrganismChristian Darabos, Ferdinando Di Cunto, Marco Tomassini, Jason H. Moore, Paolo Provero, Mario Giacobini. 59-68 [doi]
- A Nearest Neighbour-Based Approach for Viral Protein Structure PredictionGualberto Asencio Cortés, Jesús S. Aguilar-Ruiz, Alfonso E. Márquez Chamorro. 69-76 [doi]
- Annotated Stochastic Context Free Grammars for Analysis and Synthesis of ProteinsEva Sciacca, Salvatore Spinella, Dino Ienco, Paola Giannini. 77-88 [doi]
- Finding Motifs in DNA Sequences Applying a Multiobjective Artificial Bee Colony (MOABC) AlgorithmDavid L. González-Álvarez, Miguel A. Vega-Rodríguez, Juan Antonio Gómez Pulido, Juan Manuel Sánchez-Pérez. 89-100 [doi]
- An Evolutionary Approach for Protein Contact Map PredictionAlfonso E. Márquez Chamorro, Federico Divina, Jesús S. Aguilar-Ruiz, Gualberto Asencio Cortés. 101-110 [doi]
- Multi-Neighborhood Search for Discrimination of Signal Peptides and Transmembrane SegmentsSami Laroum, Béatrice Duval, Dominique Tessier, Jin-Kao Hao. 111-122 [doi]
- Approximation of Graph Kernel Similarities for Chemical Graphs by Kernel Principal Component AnalysisGeorg Hinselmann, Andreas Jahn, Nikolas Fechner, Lars Rosenbaum, Andreas Zell. 123-134 [doi]
- Experimental Approach for Bacterial Strains CharacterizationFabien Chhel, Adrien Goëffon, Frédéric Lardeux, Frédéric Saubion, Gilles Hunault, Tristan Boureau. 135-140 [doi]
- Do Diseases Spreading on Bipartite Networks Have Some Evolutionary Advantage?Luca Ferreri, Ezio Venturino, Mario Giacobini. 141-146 [doi]
- Genetic Algorithm Optimization of Force Field Parameters: Application to a Coarse-Grained Model of RNAFilip Leonarski, Fabio Trovato, Valentina Tozzini, Joanna Trylska. 147-152 [doi]
- A Decision Tree-Based Method for Protein Contact Map PredictionCosme Ernesto Santiesteban Toca, Alfonso E. Márquez Chamorro, Gualberto Asencio Cortés, Jesús S. Aguilar-Ruiz. 153-158 [doi]
- A Comparison of Machine Learning Methods for the Prediction of Breast CancerSara Silva, Orlando Anunciação, Marco Lotz. 159-170 [doi]
- An Automatic Identification and Resolution System for Protein-Related Abbreviations in Scientific PapersPaolo Atzeni, Fabio Polticelli, Daniele Toti. 171-176 [doi]
- Protein Complex Discovery from Protein Interaction Network with High False-Positive RateYunku Yeu, Jaegyoon Ahn, Youngmi Yoon, Sanghyun Park. 177-182 [doi]