Abstract is missing.
- Deriving Protein Backbone Using Traces Extracted from Density Maps at Medium ResolutionsKamal Al-Nasr, Jing He. 1-11 [doi]
- Binary Contingency Table Method for Analyzing Gene Mutation in Cancer GenomeEmi Ayada, Atsushi Niida, Takanori Hasegawa, Satoru Miyano, Seiya Imoto. 12-23 [doi]
- A Filter-Based Approach for Approximate Circular Pattern MatchingMd. Aashikur Rahman Azim, Costas S. Iliopoulos, M. Sohel Rahman, M. Samiruzzaman. 24-35 [doi]
- Fast Algorithms for Inferring Gene-Species AssociationsArkadiusz Betkier, Pawel Szczesny, Pawel Górecki. 36-47 [doi]
- Couplet Supertree Based Species Tree EstimationSourya Bhattacharyya, Jayanta Mukhopadhyay. 48-59 [doi]
- A Novel Computational Method for Deriving Protein Secondary Structure Topologies Using Cryo-EM Density Maps and Multiple Secondary Structure PredictionsAbhishek Biswas, Desh Ranjan, Mohammad Zubair, Jing He. 60-71 [doi]
- Managing Reproducible Computational Experiments with Curated Proteins in KINARI-2John Christopher Bowers, Rose Tharail John, Ileana Streinu. 72-83 [doi]
- Protein Crystallization Screening Using Associative Experimental DesignImren Dinç, Marc L. Pusey, Ramazan S. Aygün. 84-95 [doi]
- DAM: A Bayesian Method for Detecting Genome-wide Associations on Multiple DiseasesXuan Guo, Jing Zhang, Zhipeng Cai, Ding-Zhu Du, Yi Pan. 96-107 [doi]
- MINED: An Efficient Mutual Information Based Epistasis Detection Method to Improve Quantitative Genetic Trait PredictionDan He, Zhanyong Wang, Laxmi Parida. 108-124 [doi]
- Domain Adaptation with Logistic Regression for the Task of Splice Site PredictionNic Herndon, Doina Caragea. 125-137 [doi]
- A Stacking-Based Approach to Identify Translated Upstream Open Reading Frames in Arabidopsis ThalianaQiwen Hu, Catharina Merchante, Anna N. Stepanova, Jose M. Alonso, Steffen Heber. 138-149 [doi]
- PRESS-PLOT: An Online Server for Protein Structural Analysis and Evaluation with Residue-level Virtual Angle Correlation PlotsYuanyuan Huang, Kejue Jia, Robert L. Jernigan, Zhijun Wu. 150-161 [doi]
- Calcium Ion Fluctuations Alter Channel Gating in a Stochastic Luminal Calcium Release Site ModelHao Ji, Yaohang Li, Seth H. Weinberg. 162-174 [doi]
- Interleaving Global and Local Search for Protein Motion ComputationKevin Molloy, Amarda Shehu. 175-186 [doi]
- On the Complexity of Duplication-Transfer-Loss Reconciliation with Non-binary Gene TreesMisagh Kordi, Mukul S. Bansal. 187-198 [doi]
- On the Near-Linear Correlation of the Eigenvalues Across BLOSUM MatricesJin Li, Yen Kaow Ng, Xingwu Liu, Shuai Cheng Li. 199-210 [doi]
- Predicting RNA Secondary Structures: One-grammar-fits-all SolutionMenglu Li, Micheal Cheng, Yongtao Ye, Wk Hon, Hf Ting, Tw Lam, Cy Tang, Thomas Wong, Sm Yiu. 211-222 [doi]
- An Approach for Matching Mixture MS/MS Spectra with a Pair of Peptide Sequences in a Protein DatabaseYi Liu, Weiping Sun, Gilles A. Lajoie, Bin Ma, Kaizhong Zhang. 223-234 [doi]
- Diploid Alignments and HaplotypingVeli Mäkinen, Daniel Valenzuela. 235-246 [doi]
- Structural Comparative Analysis of Ecto- NTPDase Models from S. Mansoni and H. SapiensVinicius Schmitz Nunes, Eveline Gomes Vasconcelos, Priscila Faria-Pinto, Carlos Cristiano H. Borges, Priscila V. S. Z. Capriles. 247-259 [doi]
- Assessing the Robustness of Parsimonious Predictions for Gene Neighborhoods from Reconciled Phylogenies: Supplementary MaterialAshok Rajaraman, Cédric Chauve, Yann Ponty. 260-271 [doi]
- Sorting Signed Circular Permutations by Super Short ReversalsGustavo Rodrigues Galvão, Christian Baudet, Zanoni Dias. 272-283 [doi]
- Multiple Alignment of Structures Using Center Of ProTeinsKaushik Roy, Satish Chandra Panigrahi, Asish Mukhopadhyay. 284-296 [doi]
- NRRC: A Non-referential Reads Compression AlgorithmSubrata Saha, Sanguthevar Rajasekaran. 297-308 [doi]
- New Heuristics for Clustering Large Biological NetworksMd. Kishwar Shafin, Kazi Lutful Kabir, Iffatur Ridwan, Tasmiah Tamzid Anannya, Rashid Saadman Karim, Mohammad Mozammel Hoque, M. Sohel Rahman. 309-319 [doi]
- A Novel Algorithm for Glycan de novo Sequencing Using Tandem Mass SpectrometryWeiping Sun, Gilles A. Lajoie, Bin Ma, Kaizhong Zhang. 320-330 [doi]
- Community Detection-Based Feature Construction for Protein Sequence ClassificationKarthik Tangirala, Nic Herndon, Doina Caragea. 331-342 [doi]
- Curvilinear Triangular Discretization of Biomedical ImagesJing Xu, Andrey N. Chernikov. 343-354 [doi]
- The Role of miRNAs in Cisplatin-Resistant HeLa CellsYubo Yang, Cuihong Dai, Zhipeng Cai, Aiju Hou, Dayou Cheng, Dechang Xu. 355-365 [doi]
- DNA AS X: An Information-Coding-Based Model to Improve the Sensitivity in Comparative Gene AnalysisNing Yu, Xuan Guo, Feng Gu, Yi Pan. 366-377 [doi]
- A Distance-Based Method for Inferring Phylogenetic Networks in the Presence of Incomplete Lineage SortingYun Yu, Luay Nakhleh. 378-389 [doi]
- Predicting Protein Functions Based on Dynamic Protein Interaction NetworksBihai Zhao, Jianxin Wang, Fang-Xiang Wu, Yi Pan. 390-401 [doi]
- An Iterative Approach for Phylogenetic Analysis of Tumor Progression Using FISH Copy NumberJun Zhou, Yu Lin, William Hoskins, Jijun Tang. 402-412 [doi]