Abstract is missing.
- Prediction of Drug Response with a Topology Based Dual-Layer Network ModelSuyun Huang, Xing-Ming Zhao. 3-12 [doi]
- GRTR: Drug-Disease Association Prediction Based on Graph Regularized Transductive Regression on Heterogeneous NetworkQiao Zhu, Jiawei Luo, Pingjian Ding, Qiu Xiao. 13-25 [doi]
- An Improved Particle Swarm Optimization with Dynamic Scale-Free Network for Detecting Multi-omics FeaturesHuiyu Li, Shengjun Li, Junliang Shang, Jin-Xing Liu, Chun-Hou Zheng. 26-37 [doi]
- PBMarsNet: A Multivariate Adaptive Regression Splines Based Method to Reconstruct Gene Regulatory NetworksSiyu Zhao, Ruiqing Zheng, Xiang Chen, Yaohang Li, Fang-Xiang Wu, Min Li. 38-48 [doi]
- Bounds on Identification of Genome Evolution PacemakersSagi Snir. 51-62 [doi]
- REXTAL: Regional Extension of Assemblies Using Linked-ReadsTunazzina Islam, Desh Ranjan, Eleanor Young, Ming Xiao, Mohammad Zubair, Harold Riethman. 63-78 [doi]
- A Scalable Reference-Free Metagenomic Binning PipelineTerry Ma, Xin-xing. 79-83 [doi]
- The Review of the Major Entropy Methods and Applications in Biomedical Signal ResearchGuangdi Liu, Yuan Xia, Chuanwei Yang, Le Zhang. 87-100 [doi]
- Inferring Dysregulated Pathways of Driving Cancer Subtypes Through Multi-omics IntegrationKai Shi 0004, Lin Gao, Bingbo Wang. 101-112 [doi]
- An Extension of Deep Pathway Analysis: A Pathway Route Analysis Framework Incorporating Multi-dimensional Cancer Genomics DataYue Zhao. 113-124 [doi]
- Hierarchical Similarity Network Fusion for Discovering Cancer SubtypesShuhui Liu, Xuequn Shang. 125-136 [doi]
- Sprites2: Detection of Deletions Based on an Accurate Alignment StrategyZhen Zhang, Jianxin Wang, Junwei Luo, Juan Shang, Min Li, Fang-Xiang Wu, Yi Pan 0001. 139-150 [doi]
- KSIBW: Predicting Kinase-Substrate Interactions Based on Bi-random WalkCanshang Deng, Qingfeng Chen, Zhixian Liu, Ruiqing Zheng, Jin Liu, Jianxin Wang, Wei Lan. 151-162 [doi]
- XPredRBR: Accurate and Fast Prediction of RNA-Binding Residues in Proteins Using eXtreme Gradient BoostingLei Deng, Zuojin Dong, Hui Liu. 163-173 [doi]
- A Biologically Meaningful Extension of the Efficient Method for Deleterious Mutations Prediction in RNAs: Insertions and Deletions in Addition to Substitution MutationsAlexander Churkin, Danny Barash. 174-178 [doi]
- Screening of Sonic Hedgehog (Shh) Inhibitors in the Hedgehog Signaling Pathway from Traditional Chinese Medicine (TCM) Database Through Structure-Based Pharmacophore DesignIlmi Fadhilah Rizki, Mochammad Arfin Fardiansyah Nasution, Syafrida Siregar, Mega Maulina Ekawati, Usman Sumo Friend Tambunan. 179-184 [doi]
- Novel Inhibitors of T315I Mutant BCR-ABL1 Tyrosine Kinase for Chronic Myeloid Leukemia Disease Through Fragment-Based Drug DesignSatya Anindita, Atika Marnolia, Hersal Hermana Putra, Muhammad Chandra Haikal, Usman Sumo Friend Tambunan. 185-190 [doi]
- On k-Mismatch Shortest Unique Substring Queries Using GPUDaniel W. Schultz, Bojian Xu. 193-204 [doi]
- Memory-Efficient and Stabilizing Management System and Parallel Methods for RELION Using CUDA and MPIJingrong Zhang, Zihao Wang, Yu Chen, Zhiyong Liu, Fa Zhang. 205-216 [doi]
- GPU Accelerated Ray Tracing for the Beta-Barrel Detection from Three-Dimensional Cryo-EM MapsAlbert Ng, Adedayo Odesile, Dong-Si. 217-226 [doi]
- A Fast Genome Sequence Aligner Based on Minimal Perfect Hash Algorithm Realized with FPGA Based Heterogeneous Computing PlatformKe Huang, Shubo Yang, Zhaojian Luo, Ke Yang, Menghan Chen, Guopeng Wei, Jian Huang. 227-232 [doi]
- A Pattern Recognition Tool for Medium-Resolution Cryo-EM Density Maps and Low-Resolution Cryo-ET Density MapsDevin Haslam, Salim Sazzed, Willy Wriggers, Julio Kovcas, Junha Song, Manfred Auer, Jing He 0002. 233-238 [doi]
- Combining Sequence and Epigenomic Data to Predict Transcription Factor Binding Sites Using Deep LearningFang Jing, Shao-Wu Zhang, Zhen Cao, Shihua Zhang. 241-252 [doi]
- A Deep Learning Method for Prediction of Benign Epilepsy with Centrotemporal SpikesMing Yan, Ling Liu, Sihan Chen, Yi Pan. 253-258 [doi]
- LSTM Recurrent Neural Networks for Influenza Trends PredictionLiyuan Liu, Meng Han, Yiyun Zhou, Yan Wang. 259-264 [doi]
- Predicting Gene-Disease Associations with Manifold LearningPing Luo, Li-Ping Tian, Bolin Chen, Qianghua Xiao, Fang-Xiang Wu. 265-271 [doi]
- On Approaching the One-Sided Exemplar Adjacency Number ProblemQingge Letu, Killian Smith, Sean Jungst, Binhai Zhu. 275-286 [doi]
- Prediction of Type III Secreted Effectors Based on Word Embeddings for Protein SequencesXiaofeng Fu, Yiqun Xiao, Yang Yang. 287-298 [doi]
- Extending the Evolvability Model to the Prokaryotic World: Simulations and Results on Real DataSagi Snir, Ben Yohay. 299-313 [doi]
- Predicting Opioid Epidemic by Using Twitter DataYubao Wu, Pavel Skums, Alex Zelikovsky, David Stiven Campo Rendon, Xueting Liao. 314-318 [doi]
- Cluster Matching Distance for Rooted Phylogenetic TreesJucheol Moon, Oliver Eulenstein. 321-332 [doi]
- Truncated Robust Principal Component Analysis and Noise Reduction for Single Cell RNA-seq DataKrzysztof Gogolewski, Maciej Sykulski, Neo Christopher Chung, Anna Gambin. 335-346 [doi]
- Locality Sensitive Imputation for Single-Cell RNA-Seq DataMarmar Moussa, Ion I. Mandoiu. 347-360 [doi]