Abstract is missing.
- Parallel Spectral Clustering for the Segmentation of cDNA Microarray ImagesSandrine Mouysset, Ronan Guivarch, Joseph Noailles, Daniel Ruiz. 1-9 [doi]
- Prognostic Prediction Using Clinical Expression Time Series: Towards a Supervised Learning Approach Based on Meta-biclustersAndré Valério Carreiro, Artur J. Ferreira, Mário A. T. Figueiredo, Sara C. Madeira. 11-20 [doi]
- Parallel e-CCC-Biclustering: Mining Approximate Temporal Patterns in Gene Expression Time Series Using Parallel BiclusteringFilipe Cristóvão, Sara C. Madeira. 21-31 [doi]
- Identification of Regulatory Binding Sites on mRNA Using in Vivo Derived Informations and SVMsCarmen Maria Livi, Luc Paillard, Enrico Blanzieri, Yann Audic. 33-41 [doi]
- Parameter Influence in Genetic Algorithm Optimization of Support Vector MachinesPaulo Gaspar, Jaime Carbonell, José Luís Oliveira. 43-51 [doi]
- Biological Knowledge Integration in DNA Microarray Gene Expression Classification Based on Rough Set TheoryDiego Calvo-Dmgz, Juan F. Gálvez, Daniel Glez-Peña, Florentino Fdez-Riverola. 53-61 [doi]
- Quantitative Assessment of Estimation Approaches for Mining over Incomplete Data in Complex Biomedical Spaces: A Case Study on Cerebral AneurysmsJesus Bisbal, Gerhard Engelbrecht, Alejandro F. Frangi. 63-71 [doi]
- ASAP: An Automated System for Scientific Literature Search in PubMed Using Web AgentsCarlos Carvalhal, Sérgio Deusdado, Leonel Deusdado. 73-78 [doi]
- Case-Based Reasoning to Classify Endodontic RetreatmentsLivia Campo, Vicente Vera, Alvaro Enrique Garcia, Juan Francisco de Paz, Juan M. Corchado. 79-86 [doi]
- A Comparative Analysis of Balancing Techniques and Attribute Reduction AlgorithmsR. Romero, Eva Lorenzo Iglesias, Lourdes Borrajo. 87-94 [doi]
- Sliced Model Checking for Phylogenetic AnalysisJosé Ignacio Requeno, Roberto Blanco, Gregorio de Miguel Casado, José Manuel Colom. 95-103 [doi]
- PHYSER: An Algorithm to Detect Sequencing Errors from Phylogenetic InformationJorge Álvarez-Jarreta, Elvira Mayordomo, Eduardo Ruiz-Pesini. 105-112 [doi]
- A Systematic Approach to the Interrogation and Sharing of Standardised Biofilm SignaturesAnália Lourenço, Andreia Ferreira, Maria Olívia Pereira, Nuno F. Azevedo. 113-120 [doi]
- Visual Analysis Tool in Comparative GenomicsJuan Francisco de Paz, Carolina Zato, María Abáigar, Ana Rodríguez-Vicente, Rocío Benito, Jesús M. Hernández. 121-127 [doi]
- From Networks to TreesMarco Alves, Joãd Alves, Rui Camacho, Pedro Soares, Luísa Pereira. 129-136 [doi]
- Procedure for Detection of Membranes in Three-Dimensional Subcellular Density MapsAntonio Martinez-Sanchez, Inmaculada García, José-Jesús Fernández. 137-145 [doi]
- A Cellular Automaton Model for Tumor Growth SimulationÁngel Monteagudo, José Santos Reyes. 147-155 [doi]
- Ectopic Foci Study on the Crest Terminalis in 3D Computer Model of Human AtrialCarlos A. Ruiz-Villa, Andrés P. Castaño, Andrés Castillo, Elvio Heidenreich. 157-164 [doi]
- SAD_BaSe: A Blood Bank Data Analysis SoftwareAugusto Ramoa, Salomé Maia, Anália Lourenço. 165-171 [doi]
- A Rare Disease Patient ManagerPedro Lopes, Rafael Mendonça, Hugo Rocha, Jorge Oliveira, Laura Vilarinho, Rosário Santos, José Luís Oliveira. 173-180 [doi]
- MorphoCol: A Powerful Tool for the Clinical Profiling of Pathogenic BacteriaAna Margarida Sousa, Anália Lourenço, Maria Olívia Pereira. 181-188 [doi]
- Applying AIBench Framework to Develop Rich User Interfaces in NGS StudiesHugo López-Fernández, Daniel Glez-Peña, Miguel Reboiro-Jato, Gonzalo Gómez-López, David G. Pisano, Florentino Fdez-Riverola. 189-196 [doi]
- Comparing Bowtie and BWA to Align Short Reads from a RNA-Seq ExperimentNuria Medina-Medina, A. Broka, S. Lacey, H. Lin, E. S. Klings, C. T. Baldwin, M. H. Steinberg, Paola Sebastiani. 197-207 [doi]
- SAMasGC: Sequencing Analysis with a Multiagent System and Grid ComputingRoberto González, Carolina Zato, Rocío Benito, María Hernández, Jesús M. Hernández, Juan Francisco de Paz. 209-216 [doi]
- Exon: A Web-Based Software Toolkit for DNA Sequence AnalysisDiogo Pratas, Armando J. Pinho, Sara P. Garcia. 217-224 [doi]
- On the Development of a Pipeline for the Automatic Detection of Positively Selected SitesDavid Reboiro-Jato, Miguel Reboiro-Jato, Florentino Fdez-Riverola, Nuno A. Fonseca, Jorge Vieira. 225-229 [doi]
- Compact Representation of Biological Sequences Using Set Decision DiagramsJosé Ignacio Requeno, José Manuel Colom. 231-239 [doi]
- Computational Tools for Strain Optimization by Adding ReactionsSara Correia, Miguel Rocha. 241-250 [doi]
- Computational Tools for Strain Optimization by Tuning the Optimal Level of Gene ExpressionEmanuel Gonçalves, Isabel Rocha, Miguel Rocha. 251-258 [doi]
- Efficient Verification for Logical Models of Regulatory NetworksPedro T. Monteiro, Claudine Chaouiya. 259-267 [doi]
- Tackling Misleading Peptide Regulation Fold Changes in Quantitative ProteomicsChristoph Gernert, Evelin Berger, Frank Klawonn, Lothar Jänsch. 269-276 [doi]
- Coffee Transcriptome Visualization Based on Functional Relationships among Gene AnnotationsLuis Fernando Castillo, Oscar Gómez-Ramírez, Narmer Galeano-Vanegas, Luis Bertel-Paternina, Gustavo A. Isaza, Álvaro Gaitán-Bustamante. 277-283 [doi]