Abstract is missing.
- Yeast Ancestral Genome Reconstructions: The Possibilities of Computational MethodsEric Tannier. 1-12 [doi]
- Natural Parameter Values for Generalized Gene AdjacencyZhenyu Yang, David Sankoff. 13-23 [doi]
- Parking Functions, Labeled Trees and DCJ Sorting ScenariosAïda Ouangraoua, Anne Bergeron. 24-35 [doi]
- Counting All DCJ Sorting ScenariosMarÃlia D. V. Braga, Jens Stoye. 36-47 [doi]
- Minimal Conflicting Sets for the Consecutive Ones Property in Ancestral Genome ReconstructionCedric Chauve, Utz-Uwe Haus, Tamon Stephen, Vivija P. You. 48-58 [doi]
- Finding Nested Common Intervals EfficientlyGuillaume Blin, Jens Stoye. 59-69 [doi]
- DCJ Median Problems on Linear Multichromosomal Genomes: Graph Representation and Fast Exact SolutionsAndrew Wei Xu. 70-83 [doi]
- Rearrangement Models and Single-Cut OperationsPaul Medvedev, Jens Stoye. 84-97 [doi]
- Aligning Two Genomic Sequences That Contain DuplicationsMinmei Hou, Cathy Riemer, Piotr Berman, Ross C. Hardison, Webb Miller. 98-110 [doi]
- Inferring the Recent Duplication History of a Gene ClusterGiltae Song, Louxin Zhang, Tomás Vinar, Webb Miller. 111-125 [doi]
- Pseudo Boolean Programming for Partially Ordered GenomesSébastien Angibaud, Guillaume Fertin, Annelyse Thévenin, Stéphane Vialette. 126-137 [doi]
- Computing the Summed Adjacency Disruption Number between Two Genomes with Duplicate Genes Using Pseudo-Boolean OptimizationJoão Delgado, Inês Lynce, Vasco M. Manquinho. 138-149 [doi]
- Reconstructing Histories of Complex Gene Clusters on a PhylogenyTomás Vinar, Brona Brejová, Giltae Song, Adam C. Siepel. 150-163 [doi]
- Co-evolutionary Models for Reconstructing Ancestral Genomic Sequences: Computational Issues and Biological ExamplesTamir Tuller, Hadas Birin, Martin Kupiec, Eytan Ruppin. 164-180 [doi]
- Whole-Genome Analysis of Gene Conversion EventsChih-Hao Hsu, Yu Zhang, Ross C. Hardison, Webb Miller. 181-192 [doi]
- A Statistically Fair Comparison of Ancestral Genome Reconstructions, Based on Breakpoint and Rearrangement DistancesZaky Adam, David Sankoff. 193-204 [doi]
- Comparative Genomics and Extensive Recombinations in Phage CommunitiesGuylaine Poisson, Mahdi Belcaid, Anne Bergeron. 205-216 [doi]
- Properties of Sequence Conservation in Upstream Regulatory and Protein Coding Sequences among Paralogs in ::::Arabidopsis thaliana::::Dale N. Richardson, Thomas Wiehe. 217-228 [doi]
- Transcription Factor Binding Probabilities in Orthologous Promoters: An Alignment-Free Approach to the Inference of Functional Regulatory TargetsXiao Liu, Neil D. Clarke. 229-240 [doi]