Abstract is missing.
- Boosting Alignment Accuracy by Adaptive Local RealignmentDan F. DeBlasio, John D. Kececioglu. 1-17 [doi]
- A Concurrent Subtractive Assembly Approach for Identification of Disease Associated Sub-metagenomesWontack Han, Mingjie Wang, Yuzhen Ye. 18-33 [doi]
- A Flow Procedure for the Linearization of Genome Sequence GraphsDavid Haussler, Maciej Smuga-Otto, Benedict Paten, Adam M. Novak, Sergei Nikitin, Maria Zueva, Dmitrii Miagkov. 34-49 [doi]
- Dynamic Alignment-Free and Reference-Free Read CompressionGuillaume Holley, Roland Wittler, Jens Stoye, Faraz Hach. 50-65 [doi]
- A Fast Approximate Algorithm for Mapping Long Reads to Large Reference DatabasesChirag Jain, Alexander T. Dilthey, Sergey Koren, Srinivas Aluru, Adam M. Phillippy. 66-81 [doi]
- Determining the Consistency of Resolved Triplets and Fan TripletsJesper Jansson, Andrzej Lingas, Ramesh Rajaby, Wing-Kin Sung. 82-98 [doi]
- Progressive Calibration and Averaging for Tandem Mass Spectrometry Statistical Confidence Estimation: Why Settle for a Single Decoy?Uri Keich, William Stafford Noble. 99-116 [doi]
- Resolving Multicopy Duplications de novo Using Polyploid PhasingMark Chaisson, Sudipto Mukherjee, Sreeram Kannan, Evan E. Eichler. 117-133 [doi]
- A Bayesian Active Learning Experimental Design for Inferring Signaling NetworksRobert Osazuwa Ness, Karen Sachs, Parag Mallick, Olga Vitek. 134-156 [doi]
- *): A Provable and Efficient Ensemble-Based Algorithm to Optimize Stability and Binding Affinity over Large Sequence SpacesAdegoke Ojewole, Jonathan D. Jou, Vance G. Fowler, Bruce Randall Donald. 157-172 [doi]
- Superbubbles, Ultrabubbles and CactiBenedict Paten, Adam M. Novak, Erik Garrison, Glenn Hickey. 173-189 [doi]
- EPR-Dictionaries: A Practical and Fast Data Structure for Constant Time Searches in Unidirectional and Bidirectional FM IndicesChristopher Pockrandt, Marcel Ehrhardt, Knut Reinert. 190-206 [doi]
- A Bayesian Framework for Estimating Cell Type Composition from DNA Methylation Without the Need for Methylation ReferenceElior Rahmani, Regev Schweiger, Liat Shenhav, Eleazar Eskin, Eran Halperin. 207-223 [doi]
- Towards Recovering Allele-Specific Cancer Genome GraphsAshok Rajaraman, Jian Ma. 224-240 [doi]
- Using Stochastic Approximation Techniques to Efficiently Construct Confidence Intervals for HeritabilityRegev Schweiger, Eyal Fisher, Elior Rahmani, Liat Shenhav, Saharon Rosset, Eran Halperin. 241-256 [doi]
- Improved Search of Large Transcriptomic Sequencing Databases Using Split Sequence Bloom TreesBrad Solomon, Carl Kingsford. 257-271 [doi]
- AllSome Sequence Bloom TreesChen Sun, Robert S. Harris, Rayan Chikhi, Paul Medvedev. 272-286 [doi]
- Longitudinal Genotype-Phenotype Association Study via Temporal Structure Auto-learning Predictive ModelXiaoqian Wang, Jingwen Yan, Xiaohui Yao, Sungeun Kim, Kwangsik Nho, Shannon L. Risacher, Andrew J. Saykin, Li Shen, Heng Huang. 287-302 [doi]
- Improving Imputation Accuracy by Inferring Causal Variants in Genetic StudiesYue Wu, Farhad Hormozdiari, Jong Wha J. Joo, Eleazar Eskin. 303-317 [doi]
- The Copy-Number Tree Mixture Deconvolution Problem and Applications to Multi-sample Bulk Sequencing Tumor DataSimone Zaccaria, Mohammed El-Kebir, Gunnar W. Klau, Benjamin J. Raphael. 318-335 [doi]
- Quantifying the Impact of Non-coding Variants on Transcription Factor-DNA BindingJingkang Zhao, Dongshunyi Li, Jungkyun Seo, Andrew S. Allen, Raluca Gordân. 336-352 [doi]
- aBayesQR: A Bayesian Method for Reconstruction of Viral Populations Characterized by Low DiversitySoyeon Ahn, Haris Vikalo. 353-369 [doi]
- BeWith: A Between-Within Method for Module Discovery in Cancer using Integrated Analysis of Mutual Exclusivity, Co-occurrence and Functional Interactions (Extended Abstract)Phuong Dao, Yoo Ah Kim, Sanna Madan, Roded Sharan, Teresa M. Przytycka. 370-371 [doi]
- K-mer Set Memory (KSM) Motif Representation Enables Accurate Prediction of the Impact of Regulatory VariantsYuchun Guo, Kevin Tian, Haoyang Zeng, David K. Gifford. 372-374 [doi]
- Network-Based Coverage of Mutational Profiles Reveals Cancer GenesBorislav H. Hristov, Mona Singh 0001. 375-376 [doi]
- Ultra-Accurate Complex Disorder Prediction: Case Study of Neurodevelopmental DisordersLinh Huynh, Fereydoun Hormozdiari. 377-378 [doi]
- Inference of the Human Polyadenylation CodeMichael K. K. Leung, Andrew Delong, Brendan J. Frey. 379 [doi]
- Folding Membrane Proteins by Deep Transfer LearningZhen Li, Sheng Wang, Yizhou Yu, Jinbo Xu. 380-382 [doi]
- A Network Integration Approach for Drug-Target Interaction Prediction and Computational Drug Repositioning from Heterogeneous InformationYunan Luo, XinBin Zhao, Jingtian Zhou, Jinling Yang, Yanqing Zhang, Wenhua Kuang, Jian Peng 0001, Ligong Chen, Jianyang Zeng. 383-384 [doi]
- Epistasis in Genomic and Survival Data of Cancer PatientsDariusz Matlak, Ewa Szczurek. 385-386 [doi]
- Ultra-Fast Identity by Descent Detection in Biobank-Scale Cohorts Using Positional Burrows-Wheeler TransformArdalan Naseri, Xiaoming Liu, Shaojie Zhang, Degui Zhi. 387-388 [doi]
- Joker de Bruijn: Sequence Libraries to Cover All k-mers Using Joker CharactersYaron Orenstein, Ryan Kim, Polly Fordyce, Bonnie Berger. 389-390 [doi]
- GATTACA: Lightweight Metagenomic Binning Using Kmer CountingVictoria Popic, Volodymyr Kuleshov, Michael P. Snyder, Serafim Batzoglou. 391-392 [doi]
- Species Tree Estimation Using ASTRAL: How Many Genes Are Enough?Shubhanshu Shekhar, Sebastien Roch, Siavash Mirarab. 393-395 [doi]
- Reconstructing Antibody Repertoires from Error-Prone Immunosequencing DatasetsAlexander Shlemov, Sergey Bankevich, Andrey Bzikadze, Yana Safonova, Pavel A. Pevzner. 396-397 [doi]
- NetREX: Network Rewiring Using EXpression - Towards Context Specific Regulatory NetworksYijie Wang, Dong-Yeon Cho, Hangnoh Lee, Brian Oliver, Teresa M. Przytycka. 398-399 [doi]
- E Pluribus Unum: United States of Single CellsJoshua D. Welch, Alexander J. Hartemink, Jan F. Prins. 400-401 [doi]
- ROSE: A Deep Learning Based Framework for Predicting Ribosome StallingSai Zhang, Hailin Hu, Jingtian Zhou, Xuan He, Tao Jiang, Jianyang Zeng. 402-403 [doi]