Table of Contents

• A Classification of de Bruijn Graph Approaches for De Novo Fragment AssemblyElvismary Molina de Armas, Maristela Holanda, Daniel de Oliveira 0001, Nalvo F. Almeida, Sérgio Lifschitz. 1-12 [doi]
• Redundancy Treatment of NGS Contigs in Microbial Genome Finishing with Hashing-Based ApproachMarcus Braga, Kenny Pinheiro, Fabrício Araújo, Fábio Miranda 0002, Artur Silva, Rommel Ramos. 13-24 [doi]
• Efficient Out-of-Core Contig GenerationJulio O. Prieto Entenza, Edward Hermann Haeusler, Sérgio Lifschitz. 25-37 [doi]
• In silico Pathogenomic Analysis of Corynebacterium Pseudotuberculosis Biovar OvisIago Rodrigues Blanco, Carlos Leonardo Araújo, Adriana Carneiro Folador. 38-49 [doi]
• Assessing the Sex-Related Genomic Composition Difference Using a k-mer-Based Approach: A Case of Study in Arapaima gigas (Pirarucu)Renata Lilian Dantas Cavalcante, José Miguel Ortega, Jorge Estefano Santana de Souza, Tetsu Sakamoto. 50-56 [doi]
• COVID-19 X-ray Image Diagnostic with Deep Neural NetworksGabriel Bianchin de Oliveira, Rafael Padilha, André Dorte, Luis Cereda, Luiz Miyazaki, Maurício Lopes, Zanoni Dias. 57-68 [doi]
• Classification of Musculoskeletal Abnormalities with Convolutional Neural NetworksGuilherme Tiaki Sassai Sato, Leodécio Braz da Silva Segundo, Zanoni Dias. 69-80 [doi]
• Combining Mutation and Gene Network Data in a Machine Learning Approach for False-Positive Cancer Driver Gene DiscoveryJorge Francisco Cutigi, Renato Feijo Evangelista, Rodrigo Henrique Ramos, Cynthia de Oliveira Lage Ferreira, Adriane Feijo Evangelista, André C. P. L. F. de Carvalho, Adenilso Simão. 81-92 [doi]
• Unraveling the Role of Nanobodies Tetrad on Their Folding and Stability Assisted by Machine and Deep Learning AlgorithmsMatheus Vitor Ferreira Ferraz, Wenny Camilla dos Santos Adan, Roberto D. Lins. 93-104 [doi]
• Experiencing DfAnalyzer for Runtime Analysis of Phylogenomic DataflowsLuiz Gustavo Dias, Marta Mattoso, Bruno Lopes 0001, Daniel de Oliveira 0001. 105-116 [doi]
• Sorting by Reversals and Transpositions with Proportion RestrictionKlairton Lima Brito, Alexsandro Oliveira Alexandrino, Andre Rodrigues Oliveira, Ulisses Dias, Zanoni Dias. 117-128 [doi]
• Heuristics for Breakpoint Graph Decomposition with Applications in Genome Rearrangement ProblemsPedro Olímpio Pinheiro, Alexsandro Oliveira Alexandrino, Andre Rodrigues Oliveira, Cid Carvalho de Souza, Zanoni Dias. 129-140 [doi]
• Center Genome with Respect to the Rank DistancePriscila Biller, João Paulo Pereira Zanetti, João Meidanis. 141-149 [doi]
• ImTeNet: Image-Text Classification Network for Abnormality Detection and Automatic Reporting on Musculoskeletal RadiographsLeodécio Braz, Vinicius Teixeira, Hélio Pedrini, Zanoni Dias. 150-161 [doi]
• A Scientometric Overview of Bioinformatics Tools in the Pseudomonas Putida Genome StudyAlex Batista Trentin, Beatriz Thomas Metzner, Glecio Oliveira Barros, Deborah Catharine de Assis Leite. 162-167 [doi]
• Polysome-seq as a Measure of Translational Profile from Deoxyhypusine Synthase Mutant in Saccharomyces cerevisiaeFernanda Manaia Demarqui, Ana Carolina Silva Paiva, Mariana Marchi Santoni, Tatiana Faria Watanabe, Sandro Roberto Valentini, Cleslei Fernando Zanelli. 168-179 [doi]
• Anti-CD3 Stimulated T Cell Transcriptome Reveals Novel ncRNAs and Correlates with a Suppressive ProfileManuela M. do Almo, Isabel G. Sousa, Waldeyr Mendes Cordeiro da Silva, Thomas Gatter, Peter F. Stadler, Steve Hoffmann, Andrea Queiroz Maranhão, Marcelo M. Brigido. 180-191 [doi]
• A Simplified Complex Network-Based Approach to mRNA and ncRNA Transcript ClassificationMurilo Montanini Breve, Fabrício Martins Lopes. 192-203 [doi]
• A Systems Biology Driven Approach to Map the EP300 Interactors Using Comprehensive Protein Interaction NetworkShivananda Kandagalla, Maria Grishina, Vladimir Potemkin, Sharath Belenahalli Shekarappa, Pavan Gollapalli. 204-214 [doi]
• Analyzing Switch Regions of Human Rab10 by Molecular Dynamics SimulationsLevy Bueno Alves, William O. Castillo-Ordoñez, Silvana Giuliatti. 215-220 [doi]
• Importance of Meta-analysis in Studies Involving Plant Responses to Climate Change in BrazilJanaina da Silva Fortirer, Adriana Grandis, Camila de Toledo Castanho, Marcos Silveira Buckeridge. 221-234 [doi]
• A Brief History of Bioinformatics Told by Data VisualizationDiego C. B. Mariano, Mívian M. Ferreira, Bruno L. Sousa, Lucianna Helene Santos, Raquel Cardoso de Melo Minardi. 235-246 [doi]
• Computational Simulations for Cyclizations Catalyzed by Plant Monoterpene SynthasesWaldeyr Mendes Cordeiro da Silva, Daniela P. de Andrade, Jakob L. Andersen, Maria Emilia Telles Walter, Marcelo M. Brigido, Peter F. Stadler, Christoph Flamm. 247-258 [doi]
• Oncogenic Signaling Pathways in MucopolysaccharidosesGerda Cristal Villalba Silva, Luis Dias Ferreira Soares, Ursula Matte. 259-264 [doi]
• Natural Products as Potential Inhibitors for SARS-CoV-2 Papain-Like Protease: An in Silico StudyJesus Alvarado-Huayhuaz, Fabian Jimenez, Gerson Cordova-Serrano, Ihosvany Camps, Wilmar Puma-Zamora. 265-270 [doi]