F. Marty Ytreberg - researchr alias

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Viewing Publication 1 - 9 from 9

2023

Statistical modeling to quantify the uncertainty of FoldX-predicted protein folding and binding stabilityYesol Sapozhnikov, Jagdish Suresh Patel, F. Marty Ytreberg, Craig R. Miller. bmcbi, 24(1):426, December 2023. [doi]

2022

Paired Simulations and Experimental Investigations into the Calcium-Dependent Conformation of AlbuminDharmeshkumar Patel, Stephanie L. Haag, Jagdish Suresh Patel, F. Marty Ytreberg, Matthew T. Bernards. jcisd, 62(5):1282-1293, 2022. [doi]

2020

Implementation of adaptive integration method for free energy calculations in molecular systemsChristopher A. Mirabzadeh, F. Marty Ytreberg. peerj-cs, 6, 2020. [doi]

2019

Implementation of adaptive integration method for free energy calculations in molecular systemsChristopher A. Mirabzadeh, F. Marty Ytreberg. peerjpre, 7, 2019. [doi]

2018

Predicting peak spectral sensitivities of vertebrate cone visual pigments using atomistic molecular simulationsJagdish Suresh Patel, Celeste J. Brown, F. Marty Ytreberg, Deborah L. Stenkamp. ploscb, 14(1), 2018. [doi]

2012

Effect of Gold Nanoparticle Conjugation on Peptide Dynamics and StructureKuo-Hao Lee, F. Marty Ytreberg. entropy, 14(4):630-641, 2012. [doi]

2011

Accurate estimation of solvation free energy using polynomial fitting techniquesConrad Shyu, F. Marty Ytreberg. jcc, 32(1):134-141, 2011. [doi]

2009

Reducing the bias and uncertainty of free energy estimates by using regression to fit thermodynamic integration dataConrad Shyu, F. Marty Ytreberg. jcc, 30(14):2297-2304, 2009. [doi]

2004

Efficient use of nonequilibrium measurement to estimate free energy differences for molecular systemsF. Marty Ytreberg, Daniel M. Zuckerman. jcc, 25(14):1749-1759, 2004. [doi]

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