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domain analysis

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Aron Marchler-Bauer

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Publications by 'Fu Lu'

Publications

Viewing Publication 1 - 9 from 9

2018

RefSeq: an update on prokaryotic genome annotation and curationDaniel H. Haft, Michael DiCuccio, Azat Badretdin, Vyacheslav Brover, Vyacheslav Chetvernin, Kathleen O'Neill, Wenjun Li, Farideh Chitsaz, Myra K. Derbyshire, Noreen R. Gonzales, Marc Gwadz, Fu Lu, Gabriele H. Marchler, James S. Song, Narmada Thanki, Roxanne A. Yamashita, ChanJuan Zheng, Françoise Thibaud-Nissen, Lewis Y. Geer, Aron Marchler-Bauer, Kim D. Pruitt. nar, 46(Database-Issue), 2018. [doi]

2017

CDD/SPARCLE: functional classification of proteins via subfamily domain architecturesAron Marchler-Bauer, Bo Yu, Lianyi Han, Jane He, Christopher J. Lanczycki, Shennan Lu, Farideh Chitsaz, Myra K. Derbyshire, Renata C. Geer, Noreen R. Gonzales, Marc Gwadz, David I. Hurwitz, Fu Lu, Gabriele H. Marchler, James S. Song, Narmada Thanki, Zhouxi Wang, Roxanne A. Yamashita, Dachuan Zhang, ChanJuan Zheng, Lewis Y. Geer, Stephen H. Bryant. nar, 45(Database-Issue), 2017. [doi]

2015

CDD: NCBI's conserved domain databaseAron Marchler-Bauer, Myra K. Derbyshire, Noreen R. Gonzales, Shennan Lu, Farideh Chitsaz, Lewis Y. Geer, Renata C. Geer, Jane He, Marc Gwadz, David I. Hurwitz, Christopher J. Lanczycki, Fu Lu, Gabriele H. Marchler, James S. Song, Narmada Thanki, Zhouxi Wang, Roxanne A. Yamashita, Dachuan Zhang, ChanJuan Zheng, Stephen H. Bryant. nar, 43(Database-Issue):222-226, 2015. [doi]

2013

CDD: conserved domains and protein three-dimensional structureAron Marchler-Bauer, ChanJuan Zheng, Farideh Chitsaz, Myra K. Derbyshire, Lewis Y. Geer, Renata C. Geer, Noreen R. Gonzales, Marc Gwadz, David I. Hurwitz, Christopher J. Lanczycki, Fu Lu, Shennan Lu, Gabriele H. Marchler, James S. Song, Narmada Thanki, Roxanne A. Yamashita, Dachuan Zhang, Stephen H. Bryant. nar, 41(Database-Issue):348-352, 2013. [doi]

2011

CDD: a Conserved Domain Database for the functional annotation of proteinsAron Marchler-Bauer, Shennan Lu, John B. Anderson, Farideh Chitsaz, Myra K. Derbyshire, Carol DeWeese-Scott, Jessica H. Fong, Lewis Y. Geer, Renata C. Geer, Noreen R. Gonzales, Marc Gwadz, David I. Hurwitz, John D. Jackson, Zhaoxi Ke, Christopher J. Lanczycki, Fu Lu, Gabriele H. Marchler, Mikhail Mullokandov, Marina V. Omelchenko, Cynthia L. Robertson, James S. Song, Narmada Thanki, Roxanne A. Yamashita, Dachuan Zhang, Naigong Zhang, ChanJuan Zheng, Stephen H. Bryant. nar, 39(Database-Issue):225-229, 2011. [doi]

2009

CDD: specific functional annotation with the Conserved Domain DatabaseAron Marchler-Bauer, John B. Anderson, Farideh Chitsaz, Myra K. Derbyshire, Carol DeWeese-Scott, Jessica H. Fong, Lewis Y. Geer, Renata C. Geer, Noreen R. Gonzales, Marc Gwadz, Siqian He, David I. Hurwitz, John D. Jackson, Zhaoxi Ke, Christopher J. Lanczycki, Cynthia A. Liebert, Chunlei Liu, Fu Lu, Shennan Lu, Gabriele H. Marchler, Mikhail Mullokandov, James S. Song, Asba Tasneem, Narmada Thanki, Roxanne A. Yamashita, Dachuan Zhang, Naigong Zhang, Stephen H. Bryant. nar, 37(Database-Issue):205-210, 2009. [doi]

2007

CDD: a conserved domain database for interactive domain family analysisAron Marchler-Bauer, John B. Anderson, Myra K. Derbyshire, Carol DeWeese-Scott, Noreen R. Gonzales, Marc Gwadz, Luning Hao, Siqian He, David I. Hurwitz, John D. Jackson, Zhaoxi Ke, Dmitri M. Krylov, Christopher J. Lanczycki, Cynthia A. Liebert, Chunlei Liu, Fu Lu, Shennan Lu, Gabriele H. Marchler, Mikhail Mullokandov, James S. Song, Narmada Thanki, Roxanne A. Yamashita, Jodie J. Yin, Dachuan Zhang, Stephen H. Bryant. nar, 35(Database-Issue):237-240, 2007. [doi]

2005

CDD: a Conserved Domain Database for protein classificationAron Marchler-Bauer, John B. Anderson, Praveen F. Cherukuri, Carol DeWeese-Scott, Lewis Y. Geer, Marc Gwadz, Siqian He, David I. Hurwitz, John D. Jackson, Zhaoxi Ke, Christopher J. Lanczycki, Cynthia A. Liebert, Chunlei Liu, Fu Lu, Gabriele H. Marchler, Mikhail Mullokandov, Benjamin A. Shoemaker, Vahan Simonyan, James S. Song, Paul A. Thiessen, Roxanne A. Yamashita, Jodie J. Yin, Dachuan Zhang, Stephen H. Bryant. nar, 33(Database-Issue):192-196, 2005. [doi]

Using shared genomic synteny and shared protein functions to enhance the identification of orthologous gene pairsXiangqun H. Zheng, Fu Lu, Zhen-Yuan Wang, Fei Zhong, Jeffrey Hoover, Richard J. Mural. bioinformatics, 21(6):703-710, 2005. [doi]

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