Jeffrey D. Varner - researchr alias

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Viewing Publication 1 - 8 from 8

2018

Dynamic Optimization with Particle Swarms (DOPS): a meta-heuristic for parameter estimation in biochemical modelsAdithya Sagar, Rachel LeCover, Christine Shoemaker, Jeffrey D. Varner. bmcsb, 12(1), 2018. [doi]

Multi-scale computational study of the Warburg effect, reverse Warburg effect and glutamine addiction in solid tumorsMengrou Shan, David Dai, Arunodai Vudem, Jeffrey D. Varner, Abraham Duncan Stroock. ploscb, 14(12), 2018. [doi]

2017

JuPOETs: a constrained multiobjective optimization approach to estimate biochemical model ensembles in the Julia programming languageDavid M. Bassen, Michael Vilkhovoy, Mason Minot, Jonathan T. Butcher, Jeffrey D. Varner. bmcsb, 11(1), 2017. [doi]

2016

Population Heterogeneity in the Epithelial to Mesenchymal Transition Is Controlled by NFAT and Phosphorylated Sp1Russell Gould, David M. Bassen, Anirikh Chakrabarti, Jeffrey D. Varner, Jonathan T. Butcher. ploscb, 12(12), 2016. [doi]

2011

Computational Modeling and Analysis of Insulin Induced Eukaryotic Translation InitiationJoshua Lequieu, Anirikh Chakrabarti, Satyaprakash Nayak, Jeffrey D. Varner. ploscb, 7(11), 2011. [doi]

2007

Computationally Derived Points of Fragility of a Human Cascade Are Consistent with Current Therapeutic StrategiesDeyan Luan, Michael Zai, Jeffrey D. Varner. ploscb, 3(7), 2007. [doi]

2005

Large-scale inference of the transcriptional regulation of Bacillus subtilisAnshuman Gupta, Jeffrey D. Varner, Costas D. Maranas. cce, 29(3):565-576, 2005. [doi]

2004

A Mixed Integer Linear Programming (MILP) Framework for Inferring Time Delay in Gene Regulatory NetworksMadhukar S. Dasika, Anshuman Gupta, Costas D. Maranas, Jeffrey D. Varner. psb 2004: 474-485 [doi]

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