John-Marc Chandonia - researchr alias

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Viewing Publication 1 - 10 from 10

2022

SCOPe: improvements to the structural classification of proteins - extended database to facilitate variant interpretation and machine learningJohn-Marc Chandonia, Lindsey Guan, Shiangyi Lin, Changhua Yu, Naomi K. Fox, Steven E. Brenner. nar, 50(D1):553-559, 2022. [doi]

2019

SCOPe: classification of large macromolecular structures in the structural classification of proteins - extended databaseJohn-Marc Chandonia, Naomi K. Fox, Steven E. Brenner. nar, 47(Database-Issue), 2019. [doi]

2014

SCOPe: Structural Classification of Proteins - extended, integrating SCOP and ASTRAL data and classification of new structuresNaomi K. Fox, Steven E. Brenner, John-Marc Chandonia. nar, 42(Database-Issue):304-309, 2014. [doi]

2011

WIST: toolkit for rapid, customized LIMS developmentY. Wayne Huang, Adam P. Arkin, John-Marc Chandonia. bioinformatics, 27(3):437-438, 2011. [doi]

2008

Data growth and its impact on the SCOP database: new developmentsAntonina Andreeva, Dave Howorth, John-Marc Chandonia, Steven E. Brenner, Tim J. P. Hubbard, Cyrus Chothia, Alexey G. Murzin. nar, 36(Database-Issue):419-425, 2008. [doi]

2007

StrBioLib: a Java library for development of custom computational structural biology applicationsJohn-Marc Chandonia. bioinformatics, 23(15):2018-2020, 2007. [doi]

2006

ANDY: a general, fault-tolerant tool for database searching on computer clustersAndrew Smith, John-Marc Chandonia, Steven E. Brenner. bioinformatics, 22(5):618-620, 2006. [doi]

2005

Comparative mapping of sequence-based and structure-based protein domainsYa Zhang, John-Marc Chandonia, Chris H. Q. Ding, Stephen R. Holbrook. bmcbi, 6:77, 2005. [doi]

2004

The ASTRAL Compendium in 2004John-Marc Chandonia, Gary Hon, Nigel S. Walker, Loredana Lo Conte, Patrice Koehl, Michael Levitt, Steven E. Brenner. nar, 32(Database-Issue):189-192, 2004.

2002

ASTRAL compendium enhancementsJohn-Marc Chandonia, Nigel S. Walker, Loredana Lo Conte, Patrice Koehl, Michael Levitt, Steven E. Brenner. nar, 30(1):260-263, 2002.

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