Kathrin Fenner - researchr alias

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Viewing Publication 1 - 8 from 8

2026

Enzyme association for environmental biotransformation reactions through contrastive learning of reaction center-specific fingerprintsKunyang Zhang, Thierry D. Marti, Silke I Probst, Serina L. Robinson, Kathrin Fenner. bioinformatics, 42(4), 2026. [doi]

2024

Advancements in biotransformation pathway prediction: enhancements, datasets, and novel functionalities in enviPathJasmin Hafner, Tim Lorsbach, Sebastian Schmidt, Liam Brydon, Katharina Dost, Kunyang Zhang, Kathrin Fenner, Jörg Wicker. jcheminf, 16(1):93, December 2024. [doi]

2023

enviRule: an end-to-end system for automatic extraction of reaction patterns from environmental contaminant biotransformation pathwaysKunyang Zhang, Kathrin Fenner. bioinformatics, 39(7), 2023. [doi]

2016

A Hybrid Machine Learning and Knowledge Based Approach to Limit Combinatorial Explosion in Biodegradation PredictionJörg Wicker, Kathrin Fenner, Stefan Kramer. In Jörg Lässig, Kristian Kersting, Katharina Morik, editors, Computational Sustainability. Volume 645 of Studies in Computational Intelligence, pages 75-97, Springer, 2016. [doi]

enviPath - The environmental contaminant biotransformation pathway resourceJörg Wicker, Tim Lorsbach, Martin Gütlein, Emanuel Schmid, Diogo Latino, Stefan Kramer 0001, Kathrin Fenner. nar, 44(Database-Issue):502-508, 2016. [doi]

2010

Predicting biodegradation products and pathways: a hybrid knowledge- and machine learning-based approachJörg Wicker, Kathrin Fenner, Lynda B. M. Ellis, Lawrence P. Wackett, Stefan Kramer. bioinformatics, 26(6):814-821, 2010. [doi]

2008

The University of Minnesota pathway prediction system: predicting metabolic logicLynda B. M. Ellis, Junfeng Gao, Kathrin Fenner, Lawrence P. Wackett. nar, 36(Web-Server-Issue):427-432, 2008. [doi]

Data-driven extraction of relative reasoning rules to limit combinatorial explosion in biodegradation pathway predictionKathrin Fenner, Junfeng Gao, Stefan Kramer, Lynda B. M. Ellis, Lawrence P. Wackett. bioinformatics, 24(18):2079-2085, 2008. [doi]

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