Kathryn Dempsey - researchr alias

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Viewing Publication 1 - 25 from 25

2014

2013

Introduction to Data Analysis and Visualization in Biomedical Informatics MinitrackHesham H. Ali, Kathryn Dempsey. hicss 2013: 2381 [doi]

On Mining Biological Signals Using Correlation NetworksKathryn Dempsey, Ishwor Thapa, Claudia Cortes, Zach Eriksen, Dhundy Bastola, Hesham H. Ali. icdm 2013: 327-334 [doi]

A structure-preserving hybrid-chordal filter for sampling in correlation networksKathryn Dempsey, Tzu-Yi Chen, Sriram Srinivasan, Sanjukta Bhowmick, Hesham H. Ali. hpcs 2013: 243-250 [doi]

A structure-preserving hybrid-chordal filter for sampling in correlation networksKathryn Dempsey, Tzu-Yi Chen, Sriram Srinivasan, Sanjukta Bhowmick, Hesham H. Ali. ieeehpcs 2013: 243-250 [doi]

Identifying Pathway Proteins in Networks using ConvergenceKathryn Dempsey, Hesham H. Ali. bcb 2013: 853 [doi]

On Identifying and Analyzing Significant Nodes in Protein-Protein Interaction NetworksRohan Khazanchi, Kathryn Dempsey, Ishwor Thapa, Hesham H. Ali. icdm 2013: 343-348 [doi]

Analysis of Incrementally Generated Clusters in Biological Networks Using Graph-Theoretic Filters and Ontology EnrichmentSean West, Kathryn Dempsey, Sanjukta Bhowmick, Hesham H. Ali. icdm 2013: 584-591 [doi]

2012

Functional identification in correlation networks using gene ontology edge annotationKathryn Dempsey, Ishwor Thapa, Dhundy Bastola, Hesham H. Ali. ijcbdd, 5(3/4):222-244, 2012. [doi]

On the design of advanced filters for biological networks using graph theoretic propertiesKathryn Dempsey, Tzu-Yi Chen, Sanjukta Bhowmick, Hesham H. Ali. bibm 2012: 1-5 [doi]

The Development of Parallel Adaptive Sampling Algorithms for Analyzing Biological NetworksKathryn Dempsey, Kanimathi Duraisamy, Sanjukta Bhowmick, Hesham H. Ali. ipps 2012: 725-734 [doi]

Function-preserving Filters for Sampling in Biological NetworksKathryn Dempsey, Sanjukta Bhowmick, Hesham H. Ali. iccs 2012: 587-595 [doi]

A Novel Multithreaded Algorithm for Extracting Maximal Chordal SubgraphsMahantesh Halappanavar, John Feo, Kathryn Dempsey, Hesham H. Ali, Sanjukta Bhowmick. icpp 2012: 58-67 [doi]

2011

A New Approach for Sequence Analysis: Illustrating an Expanded Bioinformatics View through Exploring Properties of the Prestin ProteinKathryn Dempsey, Benjamin Currall, Richard Hallworth, Hesham H. Ali. In Limin Angela Liu, Dong-Qing Wei, Yixue Li, Huimin Lei, editors, Handbook of Research on Computational and Systems Biology - Interdisciplinary Applications. pages 202-223, IGI Global, 2011. [doi]

A Parallel Graph Sampling Algorithm for Analyzing Gene Correlation NetworksKathryn Dempsey, Kanimathi Duraisamy, Hesham H. Ali, Sanjukta Bhowmick. procedia, 4:136-145, 2011. [doi]

A Novel Correlation Networks Approach for the Identification of Gene TargetsKathryn Dempsey, Stephen Bonasera, Dhundy Bastola, Hesham H. Ali. hicss 2011: 1-8 [doi]

Identifying modular function via edge annotation in gene correlation networks using Gene Ontology searchKathryn Dempsey, Ishwor Thapa, Dhundy Bastola, Hesham H. Ali. bibm 2011: 255-261 [doi]

Evaluation of essential genes in correlation networks using measures of centralityKathryn Dempsey, Hesham H. Ali. bibm 2011: 509-515 [doi]

A noise reducing sampling approach for uncovering critical properties in large scale biological networksKanimathi Duraisamy, Kathryn Dempsey, Hesham H. Ali, Sanjukta Bhowmick. ieeehpcs 2011: 721-728 [doi]

2010

An intelligent data-centric approach toward identification of conserved motifs in protein sequencesKathryn Dempsey, Benjamin Currall, Richard Hallworth, Hesham H. Ali. bcb 2010: 398-401 [doi]

2008

MTAP: The Motif Tool Assessment PlatformDaniel Quest, Kathryn Dempsey, Mohammad Shafiullah, Dhundy Bastola, Hesham H. Ali. bmcbi, 9(S-9), 2008. [doi]

A parallel architecture for regulatory motif algorithm assessmentDaniel Quest, Kathryn Dempsey, Mohammad Shafiullah, Dhundy Bastola, Hesham H. Ali. ipps 2008: 1-8 [doi]

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Publications by 'Kathryn Dempsey'

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