Liam J. McGuffin - researchr alias

researchr

You are not signed in
Sign in
Sign up

Viewing Publication 1 - 29 from 29

2023

CAID prediction portal: a comprehensive service for predicting intrinsic disorder and binding regions in proteinsAlessio Del Conte, Adel Bouhraoua, Mahta Mehdiabadi, Damiano Clementel, Alexander Miguel Monzon, Alex S. Holehouse, Daniel A. Griffith, Ryan J. Emenecker, Ashwini Patil, Ronesh Sharma, Tatsuhiko Tsunoda, Alok Sharma, Yi-Jun Tang, Bin Liu, Claudio Mirabello, Björn Wallner, Burkhard Rost, Dagmar Ilzhöfer, Maria Littmann, Michael Heinzinger, Lea I M. Krautheimer, Michael Bernhofer, Liam J. McGuffin, Isabelle Callebaut, Tristan Bitard-Feildel, Jian Liu, Jianlin Cheng, Zhiye Guo, Jinbo Xu, Sheng Wang, Nawar Malhis, Jörg Gsponer, Chol-Song Kim, Kun-Sop Han, Myong-Chol Ma, Lukasz A. Kurgan, Sina Ghadermarzi, Akila Katuwawala, Bi Zhao, Zhenling Peng, Zhonghua Wu, Gang Hu, Kui Wang, Md. Tamjidul Hoque, Md Wasi Ul Kabir, Michele Vendruscolo, Pietro Sormanni, Min Li, Fuhao Zhang, Pengzhen Jia, Yida Wang, Michail Yu. Lobanov, Oxana V. Galzitskaya, Wim F. Vranken, Adrián Díaz, Thomas Litfin, Yaoqi Zhou, Jack Hanson, Kuldip K. Paliwal, Zsuzsanna Dosztányi, Gábor Erdös 0002, Silvio C. E. Tosatto, Damiano Piovesan. nar, 51(W1):62-69, July 2023. [doi]

Prediction of protein structures, functions and interactions using the IntFOLD7, MultiFOLD and ModFOLDdock serversLiam J. McGuffin, Nicholas S. Edmunds, Ahmet G. Genc, Shuaa M. A Alharbi, Bajuna R. Salehe, Recep Adiyaman. nar, 51(W1):274-280, July 2023. [doi]

2021

ReFOLD3: refinement of 3D protein models with gradual restraints based on predicted local quality and residue contactsRecep Adiyaman, Liam J. McGuffin. nar, 49(Webserver-Issue):589-596, 2021. [doi]

ModFOLD8: accurate global and local quality estimates for 3D protein modelsLiam J. McGuffin, Fahd M. F. Aldowsari, Shuaa M. A Alharbi, Recep Adiyaman. nar, 49(Webserver-Issue):425-430, 2021. [doi]

2019

IntFOLD: an integrated web resource for high performance protein structure and function predictionLiam J. McGuffin, Recep Adiyaman, Ali H. A. Maghrabi, Ahmad N. Shuid, Danielle A. Brackenridge, John O. Nealon, Limcy S. Philomina. nar, 47(Webserver-Issue), 2019. [doi]

2017

ModFOLD6: an accurate web server for the global and local quality estimation of 3D protein modelsAli H. A. Maghrabi, Liam J. McGuffin. nar, 45(Webserver-Issue), 2017. [doi]

ReFOLD: a server for the refinement of 3D protein models guided by accurate quality estimatesAhmad N. Shuid, Robert Kempster, Liam J. McGuffin. nar, 45(Webserver-Issue), 2017. [doi]

2015

IntFOLD: an integrated server for modelling protein structures and functions from amino acid sequencesLiam J. McGuffin, Jennifer D. Atkins, Bajuna R. Salehe, Ahmad N. Shuid, Daniel B. Roche. nar, 43(Webserver-Issue), 2015. [doi]

2013

The ModFOLD4 server for the quality assessment of 3D protein modelsLiam J. McGuffin, Maria T. Buenavista, Daniel B. Roche. nar, 41(Webserver-Issue):368-372, 2013. [doi]

The FunFOLD2 server for the prediction of protein-ligand interactionsDaniel B. Roche, Maria T. Buenavista, Liam J. McGuffin. nar, 41(Webserver-Issue):303-307, 2013. [doi]

2012

Improvement of 3D protein models using multiple templates guided by single-template model quality assessmentMaria T. Buenavista, Daniel B. Roche, Liam J. McGuffin. bioinformatics, 28(14):1851-1857, 2012. [doi]

2011

FunFOLD: an improved automated method for the prediction of ligand binding residues using 3D models of proteinsDaniel B. Roche, Stuart J. Tetchner, Liam J. McGuffin. bmcbi, 12:160, 2011. [doi]

The IntFOLD server: an integrated web resource for protein fold recognition, 3D model quality assessment, intrinsic disorder prediction, domain prediction and ligand binding site predictionDaniel B. Roche, Maria T. Buenavista, Stuart J. Tetchner, Liam J. McGuffin. nar, 39(Web-Server-Issue):171-176, 2011. [doi]

2010

Rapid model quality assessment for protein structure predictions using the comparison of multiple models without structural alignmentsLiam J. McGuffin, Daniel B. Roche. bioinformatics, 26(2):182-188, 2010. [doi]

The binding site distance test score: a robust method for the assessment of predicted protein binding sitesDaniel B. Roche, Stuart J. Tetchner, Liam J. McGuffin. bioinformatics, 26(22):2920-2921, 2010. [doi]

2008

The ModFOLD server for the quality assessment of protein structural modelsLiam J. McGuffin. bioinformatics, 24(4):586-587, 2008. [doi]

Intrinsic disorder prediction from the analysis of multiple protein fold recognition modelsLiam J. McGuffin. bioinformatics, 24(16):1798-1804, 2008. [doi]

2007

Benchmarking consensus model quality assessment for protein fold recognitionLiam J. McGuffin. bmcbi, 8, 2007. [doi]

2006

High throughput profile-profile based fold recognition for the entire human proteomeLiam J. McGuffin, Richard T. Smith, Kevin Bryson, SÃ¸ren-Aksel SÃ¸rensen, David T. Jones. bmcbi, 7:288, 2006. [doi]

2005

Protein structure prediction servers at University College LondonKevin Bryson, Liam J. McGuffin, Russell L. Marsden, Jonathan J. Ward, Jaspreet Singh Sodhi, David T. Jones. nar, 33(Web-Server-Issue):36-38, 2005. [doi]

Improving sequence-based fold recognition by using 3D model quality assessmentChris S. Pettitt, Liam J. McGuffin, David T. Jones. bioinformatics, 21(17):3509-3515, 2005. [doi]

2004

2003

Improvement of the GenTHREADER Method for Genomic Fold RecognitionLiam J. McGuffin, David T. Jones. bioinformatics, 19(7):874-881, 2003.

Secondary structure prediction with support vector machinesJonathan J. Ward, Liam J. McGuffin, Bernard F. Buxton, David T. Jones. bioinformatics, 19(13):1650-1655, 2003.

2001

What are the baselines for protein fold recognition?Liam J. McGuffin, Kevin Bryson, David T. Jones. bioinformatics, 17(1):63-72, 2001.

2000

The PSIPRED protein structure prediction serverLiam J. McGuffin, Kevin Bryson, David T. Jones. bioinformatics, 16(4):404-405, 2000.

All Publications

Filter by Year
OR AND NOT 1

Filter by Type
OR AND NOT 1

Filter by Tag
OR AND NOT 1

Filter by Venue
OR AND NOT 1

Filter by Author

[+]
OR AND NOT 1

Filter by Top Terms

[+]
OR AND NOT 1

Researchr

Publications by 'Liam J. McGuffin'

Viewing Publication 1 - 29 from 29

2023

2021

2019

2017

2015

2013

2012

2011

2010

2008

2007

2006

2005

2004

2003

2001

2000

All Publications

Filter by YearOR AND NOT 1

Filter by TypeOR AND NOT 1

Filter by TagOR AND NOT 1

Filter by VenueOR AND NOT 1

Filter by Author [+]OR AND NOT 1

Filter by Top Terms [+]OR AND NOT 1

Researchr

Publications by 'Liam J. McGuffin'

Viewing Publication 1 - 29 from 29

2023

2021

2019

2017

2015

2013

2012

2011

2010

2008

2007

2006

2005

2004

2003

2001

2000

Filter by Year
OR AND NOT 1

Filter by Type
OR AND NOT 1

Filter by Tag
OR AND NOT 1

Filter by Venue
OR AND NOT 1

Filter by Author

[+]
OR AND NOT 1

Filter by Top Terms

[+]
OR AND NOT 1