Martin Kollmar - researchr alias

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Viewing Publication 1 - 11 from 11

2015

diArk - the database for eukaryotic genome and transcriptome assemblies in 2014Martin Kollmar, Lotte Kollmar, Björn Hammesfahr, Dominic Simm. nar, 43(Database-Issue):1107-1112, 2015. [doi]

GenePainter v. 2.0 resolves the taxonomic distribution of intron positionsStefanie Mühlhausen, Marcel Hellkamp, Martin Kollmar. bioinformatics, 31(8):1302-1304, 2015. [doi]

Waggawagga: comparative visualization of coiled-coil predictions and detection of stable single α-helices (SAH domains)Dominic Simm, Klas Hatje, Martin Kollmar. bioinformatics, 31(5):767-769, 2015. [doi]

2014

kmacs: fast alignment-free sequence comparison based on inexact word matchesSebastian Horwege, Sebastian Lindner, Marcus Boden, Klas Hatje, Martin Kollmar, Chris-Andre Leimeister, Burkhard Morgenstern. nar, 42(Webserver-Issue):7-11, 2014. [doi]

2013

GenePainter: a fast tool for aligning gene structures of eukaryotic protein families, visualizing the alignments and mapping gene structures onto protein structuresBjörn Hammesfahr, Florian Odronitz, Stefanie Mühlhausen, Stephan Waack, Martin Kollmar. bmcbi, 14:77, 2013. [doi]

WebScipio: reconstructing alternative splice variants of eukaryotic proteinsKlas Hatje, Björn Hammesfahr, Martin Kollmar. nar, 41(Webserver-Issue):504-509, 2013. [doi]

ShereKhan - calculating exchange parameters in relaxation dispersion data from CPMG experimentsAdam Mazur, Björn Hammesfahr, Christian Griesinger, Donghan Lee, Martin Kollmar. bioinformatics, 29(14):1819-1820, 2013. [doi]

Peakr: simulating solid-state NMR spectra of proteinsRobert Schneider, Florian Odronitz, Björn Hammesfahr, Marcel Hellkamp, Martin Kollmar. bioinformatics, 29(9):1134-1140, 2013. [doi]

2011

A novel hybrid gene prediction method employing protein multiple sequence alignmentsOliver Keller, Martin Kollmar, Mario Stanke, Stephan Waack. bioinformatics, 27(6):757-763, 2011. [doi]

Predicting mutually exclusive spliced exons based on exon length, splice site and reading frame conservation, and exon sequence homologyHolger Pillmann, Klas Hatje, Florian Odronitz, Bjorn Hammesfahr, Martin Kollmar. bmcbi, 12:270, 2011. [doi]

2008

Scipio: Using protein sequences to determine the precise exon/intron structures of genes and their orthologs in closely related speciesOliver Keller, Florian Odronitz, Mario Stanke, Martin Kollmar, Stephan Waack. bmcbi, 9, 2008. [doi]

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