Philip T. L. C. Clausen - researchr alias

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Viewing Publication 1 - 5 from 5

2024

ARGprofiler - a pipeline for large-scale analysis of antimicrobial resistance genes and their flanking regions in metagenomic datasetsHannah-Marie Martiny, Nikiforos Pyrounakis, Thomas Nordahl Petersen, Oksana Lukjancenko, Frank Aarestrup, Philip T. L. C. Clausen, Patrick Munk. bioinformatics, 40(3), March 2024. [doi]

2023

Scaling neighbor joining to one million taxa with dynamic and heuristic neighbor joiningPhilip T. L. C. Clausen. bioinformatics, 39(1), January 2023. [doi]

2021

Automated download and clean-up of family-specific databases for kmer-based virus identificationRosa L. Allesøe, Camilla K. Lemvigh, My V. T. Phan, Philip T. L. C. Clausen, Alfred F. Florensa, Marion Koopmans, Ole Lund, Matthew Cotten. bioinformatics, 37(5):705-710, 2021. [doi]

SinEx DB 2.0 update 2020: database for eukaryotic single-exon coding sequencesRoddy Jorquera, Carolina González, Philip T. L. C. Clausen, Bent Petersen, David S. Holmes. biodb, 2021, 2021. [doi]

2018

Rapid and precise alignment of raw reads against redundant databases with KMAPhilip T. L. C. Clausen, Frank Aarestrup, Ole Lund. bmcbi, 19(1), 2018. [doi]

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