Ruth Isserlin - researchr alias

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Viewing Publication 1 - 12 from 12

2020

netDx: Software for building interpretable patient classifiers by multi-'omic data integration using patient similarity networksShraddha Pai, Philipp Weber, Ruth Isserlin, Hussam Kaka, Shirley Hui, Muhammad Ahmad Shah, Luca Giudice, Rosalba Giugno, Anne Krogh Nøhr, Jan Baumbach, Gary D. Bader. f1000research, 9:1239, 2020. [doi]

2019

RCy3: Network biology using Cytoscape from within RJulia A. Gustavsen, Shraddha Pai, Ruth Isserlin, Barry Demchak, Alexander R. Pico. f1000research, 8:1774, 2019. [doi]

2016

Global neuroscience and mental health research: a bibliometrics case studyAlison Buchan, Eva Jurczyk, Ruth Isserlin, Gary D. Bader. scientometrics, 109(1):515-531, 2016. [doi]

AutoAnnotate: A Cytoscape app for summarizing networks with semantic annotationsMike Kucera, Ruth Isserlin, Arkady Arkhangorodsky, Gary D. Bader. f1000research, 5:1717, 2016. [doi]

2015

Social Network: a Cytoscape app for visualizing co-publication networksVictor Kofia, Ruth Isserlin, Alison Buchan, Gary D. Bader. f1000research, 4:481, 2015. [doi]

2014

Enrichment Map - a Cytoscape app to visualize and explore OMICs pathway enrichment resultsRuth Isserlin, Daniele Merico, Veronique Voisin, Gary D. Bader. f1000research, 3:141, 2014. [doi]

2011

The Biomolecular Interaction Network Database in PSI-MI 2.5Ruth Isserlin, Rashad Badrawi, Gary D. Bader. biodb, 2011, 2011. [doi]

WordCloud: a Cytoscape plugin to create a visual semantic summary of networksLayla Oesper, Daniele Merico, Ruth Isserlin, Gary D. Bader. scfbm, 6:7, 2011. [doi]

2007

Structure-Templated Predictions of Novel Protein Interactions from Sequence InformationDoron Betel, Kevin E. Breitkreuz, Ruth Isserlin, Danielle Dewar-Darch, Mike Tyers, Christopher W. V. Hogue. ploscb, 3(9), 2007. [doi]

2005

The Biomolecular Interaction Network Database and related tools 2005 updateC. Alfarano, C. E. Andrade, K. Anthony, N. Bahroos, M. Bajec, K. Bantoft, Doron Betel, B. Bobechko, K. Boutilier, E. Burgess, K. Buzadzija, R. Cavero, C. D Abreo, Ian Donaldson, D. Dorairajoo, M. J. Dumontier, M. R. Dumontier, V. Earles, R. Farrall, Howard J. Feldman, E. Garderman, Y. Gong, R. Gonzaga, V. Grytsan, E. Gryz, V. Gu, E. Haldorsen, A. Halupa, R. Haw, A. Hrvojic, L. Hurrell, Ruth Isserlin, F. Jack, F. Juma, A. Khan, T. Kon, S. Konopinsky, V. Le, E. Lee, S. Ling, M. Magidin, J. Moniakis, J. Montojo, S. Moore, B. Muskat, I. Ng, J. P. Paraiso, B. Parker, Greg Pintilie, R. Pirone, John J. Salama, S. Sgro, T. Shan, Y. Shu, J. Siew, D. Skinner, Kevin A. Snyder, R. Stasiuk, D. Strumpf, Brigitte Tuekam, S. Tao, Z. Wang, M. White, R. Willis, Cheryl Wolting, S. Wong, A. Wrong, C. Xin, R. Yao, B. Yates, S. Zhang, K. Zheng, Tony Pawson, B. F. Francis Ouellette, Christopher W. V. Hogue. nar, 33(Database-Issue):418-424, 2005. [doi]

The Biomolecular Interaction Network Database and related tools 2005 updateC. Alfarano, C. E. Andrade, K. Anthony, N. Bahroos, M. Bajec, K. Bantoft, Doron Betel, B. Bobechko, K. Boutilier, E. Burgess, K. Buzadzija, R. Cavero, C. D'Abreo, Ian M. Donaldson, D. Dorairajoo, M. J. Dumontier, M. R. Dumontier, V. Earles, R. Farrall, Howard J. Feldman, E. Garderman, Y. Gong, R. Gonzaga, V. Grytsan, E. Gryz, V. Gu, E. Haldorsen, A. Halupa, R. Haw, A. Hrvojic, L. Hurrell, Ruth Isserlin, F. Jack, F. Juma, A. Khan, T. Kon, S. Konopinsky, V. Le, E. Lee, S. Ling, M. Magidin, J. Moniakis, J. Montojo, S. Moore, B. Muskat, I. Ng, J. P. Paraiso, Benjamin D. Parker, Greg Pintilie, R. Pirone, John J. Salama, S. Sgro, T. Shan, Y. Shu, J. Siew, D. Skinner, Kevin A. Snyder, R. Stasiuk, D. Strumpf, Brigitte Tuekam, S. Tao, Z. Wang, M. White, R. Willis, Cheryl Wolting, S. Wong, A. Wrong, C. Xin, R. Yao, B. Yates, Shudong Zhang, K. Zheng, Tony Pawson, B. F. Francis Ouellette, Christopher W. V. Hogue. nar, 33(Database-Issue):418-424, 2005. [doi]

2002

SeqHound: biological sequence and structure database as a platform for bioinformatics researchKaterina Michalickova, Gary D. Bader, Michel Dumontier, Hao Lieu, Doron Betel, Ruth Isserlin, Christopher W. V. Hogue. bmcbi, 3:32, 2002. [doi]

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