Wenjie Du 0003 - researchr alias

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Viewing Publication 1 - 12 from 12

2026

Med-SRAF: A Multi-Agent Framework for Medical Reasoning via Semantic Routing and Agentic FusionXiao Li, Zhuo Chen, Jun Xia 0001, Hongxin Xiang, Chao Wang, Wenjie Du 0003, Yang Wang 0015. acl 2026: 38009-38029 [doi]

MSAnchor: De Novo Molecular Generation from Mass Spectrometry Data with Anchor-Extended Molecular ScaffoldsXiaohan Qin, Chao Wang, Zhengyang Zhou, Linjiang Chen, Wenjie Du 0003, Yang Wang 0015. AAAI 2026: 953-961 [doi]

2025

ModuLM: Enabling Modular and Multimodal Molecular Relational Learning with Large Language ModelsZhuo Chen, Yizhen Zheng, Huan Yee Koh, Hongxin Xiang, Linjiang Chen, Wenjie Du 0003, Yang Wang 0015. nips 2025: [doi]

Soft causal learning for generalized molecule property prediction: An environment modeling perspectiveLimin Li, Zhengyang Zhou, Kuo Yang, Wenjie Du 0003, Pengkun Wang 0001, Yang Wang 0015. kais, 67(12):12759-12782, December 2025. [doi]

Bridging the Gap Between Cross-Domain Theory and Practical Application: A Case Study on Molecular DissolutionSihan Wang, Wenjie Du 0003, Qing Zhu, Yang Wang 0015. nips 2025: [doi]

TRGH-PPI: Effective and Generalized Prediction of Protein-Protein Interactions Through Transformer and GraphSihan Wang, Shuai Zhang, Zhuo Chen, Xuqiang Li, Jianmin Wang 0016, Wenjie Du 0003, Yang Wang 0015. tcbb, 22(5):2230-2240, 2025. [doi]

An image-based protein-ligand binding representation learning framework via multi-level flexible dynamics trajectory pre-trainingHongxin Xiang, Mingquan Liu, Linlin Hou, Shuting Jin, Jianmin Wang 0016, Jun Xia 0001, Wenjie Du 0003, Sisi Yuan, Xiangzheng Fu, Xinyu Yang, Li Zeng, Lei Xu 0047. bioinformatics, 41(10), 2025. [doi]

EDBench: Large-Scale Electron Density Data for Molecular ModelingHongxin Xiang, Ke Li, Mingquan Liu, Zhixiang Cheng, Bin Yao, Wenjie Du 0003, Jun Xia 0001, Li Zeng, Xin Jin 0014, Xiangxiang Zeng. nips 2025: [doi]

Enhancing Graph Invariant Learning from a Negative Inference PerspectiveKuo Yang, Zhengyang Zhou, Qihe Huang, Wenjie Du 0003, Limin Li, Wu Jiang, Yang Wang 0015. icml 2025: [doi]

IIB-DDI: Invariant Information Bottleneck Theory for Out-of-Distribution Drug-Drug Interaction PredictionJiahui Zhang, Shuai Zhang, Xuqiang Li, Di Wu 0057, Sihan Wang, Limin Li, Wenjie Du 0003, Yang Wang 0015. tcbb, 22(3):1009-1022, 2025. [doi]

Dynamic and Chemical Constraints to Enhance the Molecular Masked Graph AutoencodersJiahui Zhang, Wenjie Du 0003, Yang Wang 0015. nips 2025: [doi]

Enhancing the Maximum Effective Window for Long-Term Time Series ForecastingJiahui Zhang, Zhengyang Zhou, Wenjie Du 0003, Yang Wang 0015. nips 2025: [doi]

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