Yovani Marrero-Ponce - researchr alias

researchr

You are not signed in
Sign in
Sign up

Viewing Publication 1 - 27 from 27

2024

Rethinking the applicability domain analysis in QSAR modelsJosé Ramón Mora, Edgar Márquez, Noel Pérez Pérez, Ernesto Contreras-Torres, Yunierkis Pérez-castillo, Guillermín Agüero-Chapín, Felix Martinez-Rios, Yovani Marrero-Ponce, Stephen J. Barigye. jcamd, 38(1):9, December 2024. [doi]

2023

StarPep Toolbox: an open-source software to assist chemical space analysis of bioactive peptides and their functions using complex networksLongendri Aguilera-Mendoza, Sebastián Ayala-Ruano, Felix Martinez-Rios, Edgar Chávez, César R. García-Jacas, Carlos A. Brizuela, Yovani Marrero-Ponce. bioinformatics, 39(8), August 2023. [doi]

From a coenzyme-like mechanism to homochiralityOsmel Martín, Yoelsy Leyva, José Suárez-Lezcano, Yunierkis Pérez-castillo, Yovani Marrero-Ponce. biosystems, 227-228:104904, May 2023. [doi]

2020

MuLiMs-MCoMPAs: A Novel Multiplatform Framework to Compute Tensor Algebra-Based Three-Dimensional Protein DescriptorsErnesto Contreras-Torres, Yovani Marrero-Ponce, Julio E. Terán, César R. García-Jacas, Carlos A. Brizuela, Juan Carlos Sánchez-Rodríguez. jcisd, 60(2):1042-1059, 2020. [doi]

Smoothed Spherical Truncation based on Fuzzy Membership Functions: Application to the Molecular EncodingCésar R. García-Jacas, Yovani Marrero-Ponce, Carlos A. Brizuela, José Suárez-Lezcano, Felix Martinez-Rios. jcc, 41(3):203-217, 2020. [doi]

Distributed and multicore QuBiLS-MIDAS software v2.0: Computing chiral, fuzzy, weighted and truncated geometrical molecular descriptors based on tensor algebraCésar R. García-Jacas, Yovani Marrero-Ponce, Ricardo Vivas-Reyes, José Suárez-Lezcano, Felix Martinez-Rios, Julio E. Terán, Longendri Aguilera-Mendoza. jcc, 41(12):1209-1227, 2020. [doi]

2019

Graph-based data integration from bioactive peptide databases of pharmaceutical interest: toward an organized collection enabling visual network analysisLongendri Aguilera-Mendoza, Yovani Marrero-Ponce, Jesus A. Beltran, Roberto Tellez-Ibarra, Hugo A. Guillen-Ramirez, Carlos A. Brizuela. bioinformatics, 35(22):4739-4747, 2019. [doi]

2018

Choquet integral-based fuzzy molecular characterizations: when global definitions are computed from the dependency among atom/bond contributions (LOVIs/LOEIs)César R. García-Jacas, Lisset Cabrera-Leyva, Yovani Marrero-Ponce, José Suárez-Lezcano, Fernando Cortés-Guzmán, Mario Pupo-Meriño, Ricardo Vivas-Reyes. jcheminf, 10(1), 2018. [doi]

2017

QuBiLS-MAS, open source multi-platform software for atom- and bond-based topological (2D) and chiral (2.5D) algebraic molecular descriptors computationsJosé R. Valdés-Martiní, Yovani Marrero-Ponce, César R. García-Jacas, Karina Martínez-Mayorga, Stephen J. Barigye, Yasser Silveira Vaz d'Almeida, Hai Pham-The, Facundo Pérez-Giménez, Carlos A. Morell. jcheminf, 9(1), 2017. [doi]

2016

Examining the predictive accuracy of the novel 3D N-linear algebraic molecular codifications on benchmark datasetsCésar R. García-Jacas, Ernesto Contreras-Torres, Yovani Marrero-Ponce, Mario Pupo-Meriño, Stephen J. Barigye, Lisset Cabrera-Leyva. jcheminf, 8(1), 2016. [doi]

Relational Agreement Measures for Similarity Searching of Cheminformatic Data SetsOscar Miguel Rivera-Borroto, José Manuel García de la Vega, Yovani Marrero-Ponce, Ricardo Grau. tcbb, 13(1):158-167, 2016. [doi]

2015

Overlap and diversity in antimicrobial peptide databases: compiling a non-redundant set of sequencesLongendri Aguilera-Mendoza, Yovani Marrero-Ponce, Roberto Tellez-Ibarra, Monica T. Llorente-Quesada, Jesús Salgado, Stephen J. Barigye, Jun Liu. bioinformatics, 31(15):2553-2559, 2015. [doi]

ProtDCal: A program to compute general-purpose-numerical descriptors for sequences and 3D-structures of proteinsYasser B. Ruiz-Blanco, Waldo Paz, James Green, Yovani Marrero-Ponce. bmcbi, 16:162, 2015. [doi]

2014

QuBiLS-MIDAS: A parallel free-software for molecular descriptors computation based on multilinear algebraic mapsCésar R. García-Jacas, Yovani Marrero-Ponce, Liesner Acevedo-Martínez, Stephen J. Barigye, José R. Valdés-Martiní, Ernesto Contreras-Torres. jcc, 35(18):1395-1409, 2014. [doi]

2013

Relations frequency hypermatrices in mutual, conditional and joint entropy-based information indicesStephen J. Barigye, Yovani Marrero-Ponce, Yoan Martínez López, Francisco Torrens, Luis Manuel Artiles-Martínez, Ricardo W. Pino-Urias, Oscar Martínez Santiago. jcc, 34(4):259-274, 2013. [doi]

2012

Retrained Classification of Tyrosinase Inhibitors and "In Silico" Potency Estimation by Using Atom-Type Linear Indices: A Powerful Tool for Speed up the Discovery of LeadsGerardo M. Casañola-Martín, Mahmud Tareq Hassan Khan, Huong Le-Thi-Thu, Yovani Marrero-Ponce, Ramón García-Domenech, Francisco Torrens, Antonio Rescigno. ijcce, 2(2):42-144, 2012. [doi]

Derivatives in discrete mathematics: a novel graph-theoretical invariant for generating new 2/3D molecular descriptors. I. Theory and QSPR applicationYovani Marrero-Ponce, Oscar Martínez Santiago, Yoan Martínez López, Stephen J. Barigye, Francisco Torrens. jcamd, 26(11):1229-1246, 2012. [doi]

2011

Comparison of Combinatorial Clustering Methods on Pharmacological Data Sets Represented by Machine Learning-Selected Real Molecular DescriptorsOscar Miguel Rivera-Borroto, Yovani Marrero-Ponce, José Manuel García de la Vega, Ricardo del Corazón Grau-Ábalo. jcisd, 51(12):3036-3049, 2011. [doi]

2008

Applying pattern recognition methods plus quantum and physico-chemical molecular descriptors to analyze the anabolic activity of structurally diverse steroidsYoanna María Alvarez-Ginarte, Yovani Marrero-Ponce, José Alberto Ruiz-García, Luis Alberto Montero-Cabrera, Jose Manuel García De La Vega, Pedro Noheda Marin, Rachel Crespo-Otero, Francisco Torrens Zaragoza, Ramón García-Domenech. jcc, 29(3):317-333, 2008. [doi]

Bond-based 3D-chiral linear indices: Theory and QSAR applications to central chirality codificationJuan A. Castillo-Garit, Yovani Marrero-Ponce, Francisco Torrens, Ramón García-Domenech, Vicente Romero-Zaldivar. jcc, 29(15):2500-2512, 2008. [doi]

Bond-based linear indices in QSAR: computational discovery of novel anti-trichomonal compoundsYovani Marrero-Ponce, Alfredo Meneses-Marcel, Oscar Miguel Rivera-Borroto, Ramón García-Domenech, Jesús Vicente de Julián-Ortiz, Alina Montero-Torres, José Antonio Escario, Alicia Gómez Barrio, David Montero Pereira, Juan José Nogal, Ricardo Grau, Francisco Torrens, Christian Vogel, Vicente J. Arán. jcamd, 22(8):523-540, 2008. [doi]

2007

TOMOCOMD-CARDD approach for drug discovery: aiding decision-making in 'in silico' selection of new lead tyrosinase inhibitorsYovani Marrero-Ponce, Mahmud Tareq Hassan Khan, Gerardo M. Casañola-Martín, Arjumand Ather, Mukhlis N. Sultankhodzhaev, Ramón García-Domenech, Francisco Torrens, Richard Rotondo. jcamd, 21(4):167-188, 2007. [doi]

2006

Bond-based global and local (bond, group and bond-type) quadratic indices and their applications to computer-aided molecular design, 1. QSPR studies of diverse sets of organic chemicalsYovani Marrero-Ponce, Francisco Torrens, Ysaias J. Alvarado, Richard Rotondo. jcamd, 20(10-11):685-701, 2006. [doi]

2005

3D-chiral Atom, Atom-type, and Total Non-stochastic and Stochastic Molecular Linear Indices and their Applications to Central Chirality CodificationYovani Marrero-Ponce, Juan A. Castillo-Garit. jcamd, 19(6):369-383, 2005. [doi]

Ligand-Based Virtual Screening and in Silico Design of New Antimalarial Compounds Using Nonstochastic and Stochastic Total and Atom-Type Quadratic MapsYovani Marrero-Ponce, Maité Iyarreta-Veitía, Alina Montero-Torres, Carlos Romero-Zaldivar, Carlos A. Brandt, Priscilla E. Ávila, Karin Kirchgatter, Yanetsy Machado. jcisd, 45(4):1082-1100, 2005. [doi]

2004

Tomocomd-Cardd, a novel approach for computer-aided ' rational' drug design: I. Theoretical and experimental assessment of a promising method for computational screening and in silico design of new anthelmintic compoundsYovani Marrero-Ponce, Juan A. Castillo-Garit, Ervelio Olazabal, Hector S. Serrano, Alcidez Morales, Nilo Castañedo, Froylán Ibarra-Velarde, Alma Huesca-Guillen, Elisa Jorge, Arletys del Valle, Francisco Torrens, Eduardo A. Castro. jcamd, 18(10):615-634, 2004. [doi]

Linear Indices of the Molecular Pseudograph s Atom Adjacency Matrix : Definition, Significance-Interpretation, and Application to QSAR Analysis of Flavone Derivatives as HIV-1 Integrase InhibitorsYovani Marrero-Ponce. jcisd, 44(6):2010-2026, 2004. [doi]

All Publications

Filter by Year
OR AND NOT 1

Filter by Type
OR AND NOT 1

Filter by Tag
OR AND NOT 1

Filter by Venue
OR AND NOT 1

Filter by Author

[+]
OR AND NOT 1

Filter by Top Terms

[+]
OR AND NOT 1

Researchr

Publications by 'Yovani Marrero-Ponce'

Viewing Publication 1 - 27 from 27

2024

2023

2020

2019

2018

2017

2016

2015

2014

2013

2012

2011

2008

2007

2006

2005

2004

All Publications

Filter by YearOR AND NOT 1

Filter by TypeOR AND NOT 1

Filter by TagOR AND NOT 1

Filter by VenueOR AND NOT 1

Filter by Author [+]OR AND NOT 1

Filter by Top Terms [+]OR AND NOT 1

Researchr

Publications by 'Yovani Marrero-Ponce'

Viewing Publication 1 - 27 from 27

2024

2023

2020

2019

2018

2017

2016

2015

2014

2013

2012

2011

2008

2007

2006

2005

2004

Filter by Year
OR AND NOT 1

Filter by Type
OR AND NOT 1

Filter by Tag
OR AND NOT 1

Filter by Venue
OR AND NOT 1

Filter by Author

[+]
OR AND NOT 1

Filter by Top Terms

[+]
OR AND NOT 1