Journal: Briefings in Bioinformatics

Volume 17, Issue 6

903 -- 911Jónathan Heras, César Domínguez, Eloy Mata, Vico Pascual, Carmen Lozano, Carmen Torres, Myriam Zarazaga. A survey of tools for analysing DNA fingerprints
912 -- 925Jónathan Heras, César Domínguez, Eloy Mata, Vico Pascual. Surveying and benchmarking techniques to analyse DNA gel fingerprint images
926 -- 937Deepak Nag Ayyala, David E. Frankhouser, Javkhlan-Ochir Ganbat, Guido Marcucci, Ralf Bundschuh, Pearlly Yan, Shili Lin. Statistical methods for detecting differentially methylated regions based on MethylCap-seq data
938 -- 952Junko Tsuji, Zhiping Weng. Evaluation of preprocessing, mapping and postprocessing algorithms for analyzing whole genome bisulfite sequencing data
953 -- 966Sebastian Steinhauser, Nils Kurzawa, Roland Eils, Carl Herrmann. A comprehensive comparison of tools for differential ChIP-seq analysis
967 -- 979Dimitrios Kleftogiannis, Panos Kalnis, Vladimir B. Bajic. Progress and challenges in bioinformatics approaches for enhancer identification
980 -- 995Antonio Mora, Geir Kjetil Sandve, Odd Stokke Gabrielsen, Ragnhild Eskeland. In the loop: promoter-enhancer interactions and bioinformatics
996 -- 1008Wei Jiang, Ramkrishna Mitra, Chen-Ching Lin, Quan Wang, Feixiong Cheng, Zhongming Zhao. Systematic dissection of dysregulated transcription factor-miRNA feed-forward loops across tumor types
1009 -- 1023Maria Chatzou, Cedrik Magis, Jia-Ming Chang, Carsten Kemena, Giovanni Bussotti, Ionas Erb, Cédric Notredame. Multiple sequence alignment modeling: methods and applications
1024 -- 1031Hongdong Li, Gilbert S. Omenn, Yuanfang Guan. A proteogenomic approach to understand splice isoform functions through sequence and expression-based computational modeling
1032 -- 1043Xihao Hu, Yang Wu, Zhi John Lu, Kevin Y. Yip. Analysis of sequencing data for probing RNA secondary structures and protein-RNA binding in studying posttranscriptional regulations
1044 -- 1059Fan Zhang, Chunyan Ren, Kwun Kit Lau, Zihan Zheng, Geming Lu, Zhengzi Yi, Yongzhong Zhao, Fei Su, Shaojun Zhang, Bin Zhang, Eric A. Sobie, Weijia Zhang, Martin J. Walsh. A network medicine approach to build a comprehensive atlas for the prognosis of human cancer
1060 -- 1069Thomas Pfau, Maria Pires Pacheco, Thomas Sauter. Towards improved genome-scale metabolic network reconstructions: unification, transcript specificity and beyond
1070 -- 1080Farnaz Barneh, Mohieddin Jafari, Mehdi Mirzaie. Updates on drug-target network; facilitating polypharmacology and data integration by growth of DrugBank database