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    Journal: Briefings in Bioinformatics

    Volume 6, Issue 4

    317 -- 0Martin J. Bishop. Editorial
    318 -- 330Colin D. Meiklejohn, Jeffrey P. Townsend. A Bayesian method for analysing spotted microarray data
    331 -- 343Paul C. Boutros, Allan B. Okey. Unsupervised pattern recognition: An introduction to the whys and wherefores of clustering microarray data
    344 -- 356William R. Hersh. Evaluation of biomedical text-mining systems: Lessons learned from information retrieval
    357 -- 369Ulf Leser, Jörg Hakenberg. What makes a gene name? Named entity recognition in the biomedical literature
    370 -- 379John W. Keele, James E. Wray. Software agents in molecular computational biology
    380 -- 389Gregory W. Carter. Inferring network interactions within a cell
    390 -- 393Paulo A. S. Nuin. WinPop 2.5: Software for representing population genetics phenomena
    394 -- 401Zuofeng Li, Li Wang, Yang Zhong. Detecting horizontal gene transfer with T-REX and RHOM programs
    402 -- 410I. King Jordan. Abstracts

    Volume 6, Issue 3

    220 -- 221Jacob Koehler. Editorial
    222 -- 238Hagit Shatkay. Hairpins in bookstacks: Information retrieval from biomedical text
    239 -- 251Irena Spasic, Sophia Ananiadou, John McNaught, Anand Kumar. Text mining and ontologies in biomedicine: Making sense of raw text
    252 -- 262Sougata Mukherjea. Information retrieval and knowledge discovery utilising a biomedical Semantic Web
    263 -- 276Andre Skusa, Alexander Rüegg, Jacob Köhler. Extraction of biological interaction networks from scientific literature
    277 -- 286Marc Weeber, Jan A. Kors, Barend Mons. Online tools to support literature-based discovery in the life sciences
    287 -- 297Matthias Scherf, Anton Epple, Thomas Werner. The next generation of literature analysis: Integration of genomic analysis into text mining

    Volume 6, Issue 2

    117 -- 0Martin J. Bishop. Editorial
    118 -- 134Igor B. Rogozin, Alexander V. Sverdlov, Vladimir N. Babenko, Eugene V. Koonin. Analysis of evolution of exon-intron structure of eukaryotic genes
    135 -- 145Rudi Alberts, Jingyuan Fu, Morris A. Swertz, L. Alrik Lubbers, Casper J. Albers, Ritsert C. Jansen. Combining microarrays and genetic analysis
    146 -- 162Ravi Sachidanandam. RNAi as a bioinformatics consumer
    163 -- 177Hendrik Fuß, Werner Dubitzky, C. Stephen Downes, Mary Jo Kurth. Mathematical models of cell cycle regulation
    178 -- 188Pieter B. T. Neerincx, Jack A. M. Leunissen. Evolution of web services in bioinformatics
    189 -- 193Jane Loveland. VEGA, the genome browser with a difference
    194 -- 198Don Gilbert. Biomolecular Interaction Network Database

    Volume 6, Issue 1

    4 -- 5Russ B. Altman. Editorial: Annual progress in bioinformatics
    6 -- 22Serafim Batzoglou. The many faces of sequence alignment
    23 -- 33Christopher Lee, Qi Wang. Bioinformatics analysis of alternative splicing
    34 -- 43Olga G. Troyanskaya. Putting microarrays in a context: Integrated analysis of diverse biological data
    44 -- 56Sean D. Mooney. Bioinformatics approaches and resources for single nucleotide polymorphism functional analysis
    57 -- 71Aaron M. Cohen, William R. Hersh. A survey of current work in biomedical text mining
    72 -- 85Peter Bengert, Thomas Dandekar. Current efforts in the analysis of RNAi and RNAi target genes
    86 -- 97David P. Kreil, Roslin Russell. There is no silver bullet - a guide to low-level data transforms and normalisation methods for microarray data
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