| 3333 | -- | 3339 | Ryan T. Koehler, Nicolas Peyret. Thermodynamic properties of DNA sequences: characteristic values for the human genome |
| 3340 | -- | 3346 | Sophia Yancopoulos, Oliver Attie, Richard Friedberg. Efficient sorting of genomic permutations by translocation, inversion and block interchange |
| 3347 | -- | 3351 | Daniel P. Aalberts, Eric G. Daub, Jesse W. Dill. Quantifying optimal accuracy of local primary sequence bioinformatics methods |
| 3352 | -- | 3359 | Sven Siebert, Rolf Backofen. MARNA: multiple alignment and consensus structure prediction of RNAs based on sequence structure comparisons |
| 3360 | -- | 3368 | Jordi Espadaler, Oriol Romero-Isart, Richard M. Jackson, Baldo Oliva. Prediction of protein-protein interactions using distant conservation of sequence patterns and structure relationships |
| 3369 | -- | 3376 | Zheng Rong Yang, Rebecca Thomson, Philip McNeil, Robert Esnouf. RONN: the bio-basis function neural network technique applied to the detection of natively disordered regions in proteins |
| 3377 | -- | 3384 | Huiqing Liu, Jinyan Li, Limsoon Wong. Use of extreme patient samples for outcome prediction from gene expression data |
| 3385 | -- | 3393 | Wei Chu, Zoubin Ghahramani, Francesco Falciani, David L. Wild. Biomarker discovery in microarray gene expression data with Gaussian processes |
| 3394 | -- | 3400 | Thomas B. Kepler, Min He, John K. Tomfohr, Blythe H. Devlin, Marcella Sarzotti, M. Louise Markert. Statistical analysis of antigen receptor spectratype data |
| 3401 | -- | 3408 | Ron Y. Pinter, Oleg Rokhlenko, Esti Yeger Lotem, Michal Ziv-Ukelson. Alignment of metabolic pathways |
| 3409 | -- | 3415 | Jingchun Sun, Jinlin Xu, Zhen Liu, Qi Liu, Aimin Zhao, Tieliu Shi, Yi-Xue Li. Refined phylogenetic profiles method for predicting protein-protein interactions |
| 3416 | -- | 3421 | Purvesh Khatri, Bogdan Done, Archana Rao, Arina Done, Sorin Draghici. A semantic analysis of the annotations of the human genome |
| 3422 | -- | 3423 | Tim J. Carver, Kim Rutherford, Matthew Berriman, Marie-Adèle Rajandream, Bart Barrell, Julian Parkhill. ACT: the Artemis comparison tool |
| 3424 | -- | 3426 | Bhaskar DasGupta, Kishori M. Konwar, Ion I. Mandoiu, Alexander A. Shvartsman. DNA-BAR: distinguisher selection for DNA barcoding |
| 3427 | -- | 3428 | Laurent Gueguen. Sarment: Python modules for HMM analysis and partitioning of sequences |
| 3429 | -- | 3430 | Mike Smith, Victor Kunin, Leon Goldovsky, Anton J. Enright, Christos A. Ouzounis. MagicMatch - cross-referencing sequence identifiers across databases |
| 3431 | -- | 3432 | Timothy F. Oliver, Bertil Schmidt, Darran Nathan, Ralf Clemens, Douglas L. Maskell. Using reconfigurable hardware to accelerate multiple sequence alignment with ClustalW |
| 3433 | -- | 3434 | Zsuzsanna Dosztányi, Veronika Csizmok, Peter Tompa, István Simon. IUPred: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content |
| 3435 | -- | 3438 | Jaime Prilusky, Clifford E. Felder, Tzviya Zeev-Ben-Mordehai, Edwin H. Rydberg, Orna Man, Jacques S. Beckmann, Israel Silman, Joel L. Sussman. FoldIndex copyright: a simple tool to predict whether a given protein sequence is intrinsically unfolded |
| 3439 | -- | 3440 | Steffen Durinck, Yves Moreau, Arek Kasprzyk, Sean Davis, Bart De Moor, Alvis Brazma, Wolfgang Huber. BioMart and Bioconductor: a powerful link between biological databases and microarray data analysis |
| 3441 | -- | 3442 | Matthieu Falque. IRILmap: linkage map distance correction for intermated recombinant inbred lines/advanced recombinant inbred strains |
| 3443 | -- | 3444 | Jin-long Li, Miao-Xin Li, H.-Y. Deng, P. E. Duffy, Hong-Wen Deng. PhD: a web database application for phenotype data management |
| 3445 | -- | 3447 | Janis E. Wigginton, Gonçalo R. Abecasis. PEDSTATS: descriptive statistics, graphics and quality assessment for gene mapping data |
| 3448 | -- | 3449 | Steven Maere, Karel Heymans, Martin Kuiper. ::::BiNGO::::: a Cytoscape plugin to assess overrepresentation of Gene Ontology categories in Biological Networks |
| 3450 | -- | 3451 | Guido Dieterich, Uwe Kärst, Jürgen Wehland, Lothar Jänsch. MineBlast: a literature presentation service supporting protein annotation by data mining of BLAST results |
| 3452 | -- | 3453 | Weijian Xuan, Stanley J. Watson, Fan Meng. GeneInfoMiner - a web server for exploring biomedical literature using batch sequence ID |
| 3454 | -- | 3455 | Markus Krummenacker, Suzanne M. Paley, Lukas A. Mueller, Thomas Yan, Peter D. Karp. Querying and computing with BioCyc databases |
| 3456 | -- | 3458 | Piotr Kraj, Richard A. McIndoe. caBIONet - A .NET wrapper to access and process genomic data stored at the National Cancer Institute s Center for Bioinformatics databases |