| 1415 | -- | 0 | Alfonso Valencia, Alex Bateman. Software patents in Bioinformatics |
| 1416 | -- | 1417 | John Quackenbush, Steven Salzberg. It is time to end the patenting of software |
| 1418 | -- | 1423 | Sophie Pasek, Jean-Loup Risler, Pierre Brézellec. Gene fusion/fission is a major contributor to evolution of multi-domain bacterial proteins |
| 1424 | -- | 1430 | Martin G. Grigorov. Global dynamics of biological systems from time-resolved omics experiments |
| 1431 | -- | 1436 | Radek Szklarczyk, Jaap Heringa. AuberGene - a sensitive genome alignment tool |
| 1437 | -- | 1439 | Zhaolei Zhang, Nicholas Carriero, Deyou Zheng, John E. Karro, Paul M. Harrison, Mark Gerstein. PseudoPipe: an automated pseudogene identification pipeline |
| 1440 | -- | 1448 | Florencio Pazos, Antonio Rausell, Alfonso Valencia. Phylogeny-independent detection of functional residues |
| 1449 | -- | 1455 | Francesco Ortuso, Thierry Langer, Stefano Alcaro. GBPM: GRID-based pharmacophore model: concept and application studies to protein-protein recognition |
| 1456 | -- | 1463 | Jianlin Cheng, Pierre Baldi. A machine learning information retrieval approach to protein fold recognition |
| 1464 | -- | 1470 | Alison L. Cuff, Robert W. Janes, Andrew C. R. Martin. Analysing the ability to retain sidechain hydrogen-bonds in mutant proteins |
| 1471 | -- | 1476 | S. E. Ahnert, K. Willbrand, F. C. S. Brown, T. M. A. Fink. Unbiased pattern detection in microarray data series |
| 1477 | -- | 1485 | Philippe Broët, Vladimir A. Kuznetsov, Jonas Bergh, Edison T. Liu, Lance D. Miller. Identifying gene expression changes in breast cancer that distinguish early and late relapse among uncured patients |
| 1486 | -- | 1494 | Xin Gao. Construction of null statistics in permutation-based multiple testing for multi-factorial microarray experiments |
| 1495 | -- | 1502 | Lars Kaderali, Thomas Zander, Ulrich Faigle, Jürgen Wolf, Joachim L. Schultze, Rainer Schrader. CASPAR: a hierarchical bayesian approach to predict survival times in cancer from gene expression data |
| 1503 | -- | 1507 | Wentian Li, Mingyi Wang, Patricia Irigoyen, Peter K. Gregersen. Inferring causal relationships among intermediate phenotypes and biomarkers: a case study of rheumatoid arthritis |
| 1508 | -- | 1514 | Quansong Ruan, Joshua A. Steele, Michael S. Schwalbach, Jed A. Fuhrman, Fengzhu Sun. A dynamic programming algorithm for binning microbial community profiles |
| 1515 | -- | 1523 | Chuen Seng Tan, Alexander Ploner, Andreas Quandt, Janne Lehtiö, Yudi Pawitan. Finding regions of significance in SELDI measurements for identifying protein biomarkers |
| 1524 | -- | 1531 | Smriti R. Ramakrishnan, Rui Mao, Aleksey A. Nakorchevskiy, John T. Prince, Willard S. Willard, Weijia Xu, Edward M. Marcotte, Daniel P. Miranker. A fast coarse filtering method for peptide identification by mass spectrometry |
| 1532 | -- | 1533 | Boris Adryan, Sarah A. Teichmann. FlyTF: a systematic review of site-specific transcription factors in the fruit fly ::::Drosophila melanogaster:::: |
| 1534 | -- | 1535 | Yann Ponty, Michel Termier, Alain Denise. GenRGenS: software for generating random genomic sequences and structures |
| 1536 | -- | 1537 | Vladimir Vacic, Lilia M. Iakoucheva, Predrag Radivojac. Two Sample Logo: a graphical representation of the differences between two sets of sequence alignments |
| 1538 | -- | 1539 | Ryo Yoshida, Tomoyuki Higuchi, Seiya Imoto, Satoru Miyano. ArrayCluster: an analytic tool for clustering, data visualization and module finder on gene expression profiles |
| 1540 | -- | 1542 | Ryota Suzuki, Hidetoshi Shimodaira. Pvclust: an R package for assessing the uncertainty in hierarchical clustering |