Journal: Bioinformatics

Volume 22, Issue 13

1543 -- 1545Jonathan D. Wren. Theory and reality for software patents: good in concept, not so good in practice
1546 -- 1550Elhanan Magidovich, Sarel J. Fleishman, Ofer Yifrach. Intrinsically disordered C-terminal segments of voltage-activated potassium channels: a possible fishing rod-like mechanism for channel binding to scaffold proteins
1551 -- 1561Christina Toft, Mario A. Fares. GRAST: a new way of genome reduction analysis using comparative genomics
1562 -- 1568Burkhard Heil, Jost Ludwig, Hella Lichtenberg-Fraté, Thomas Lengauer. Computational recognition of potassium channel sequences
1569 -- 1576Kavitha Bhasi, Li Zhang, Daniel Brazeau, Aidong Zhang, Murali Ramanathan. VizStruct for visualization of genome-wide SNP analyses
1577 -- 1584Zhi Wei, Shane T. Jensen. GAME: detecting ::::cis::::-regulatory elements using a genetic algorithm
1585 -- 1592Orhan Çamoglu, Tolga Can, Ambuj K. Singh. Integrating multi-attribute similarity networks for robust representation of the protein space
1593 -- 1599Deniz Dalli, Andreas Wilm, Indra Mainz, Gerhard Steger. StrAl: progressive alignment of non-coding RNA using base pairing probability vectors in quadratic time
1600 -- 1607Adrian Alexa, Jörg Rahnenführer, Thomas Lengauer. Improved scoring of functional groups from gene expression data by decorrelating GO graph structure
1608 -- 1615Geoffrey J. McLachlan, Richard Bean, Liat Ben-Tovim Jones. A simple implementation of a normal mixture approach to differential gene expression in multiclass microarrays
1616 -- 1622Golan Yona, William Dirks, Shafquat Rahman, David M. Lin. Effective similarity measures for expression profiles
1623 -- 1630Hon Nian Chua, Wing-Kin Sung, Limsoon Wong. Exploiting indirect neighbours and topological weight to predict protein function from protein-protein interactions
1631 -- 1640Dong-Yeon Cho, Kwang-Hyun Cho, Byoung-Tak Zhang. Identification of biochemical networks by S-tree based genetic programming
1641 -- 1647Lei Nie, Gang Wu, Fred J. Brockman, Weiwen Zhang. Integrated analysis of transcriptomic and proteomic data of ::::Desulfovibrio vulgaris::::: zero-inflated Poisson regression models to predict abundance of undetected proteins
1648 -- 1655Shanfeng Zhu, Keiko Udaka, John Sidney, Alessandro Sette, Kiyoko F. Aoki-Kinoshita, Hiroshi Mamitsuka. Improving MHC binding peptide prediction by incorporating binding data of auxiliary MHC molecules
1656 -- 1657I. Mihalek, I. Res, Olivier Lichtarge. Evolutionary trace report_maker: a new type of service for comparative analysis of proteins
1658 -- 1659Weizhong Li, Adam Godzik. Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences
1660 -- 1661Olga Kirillova, Wladek Minor. Map2mod - a server for evaluation of crystallographic models and their agreement with electron density maps
1662 -- 1664Hiro Takahashi, Hiroyuki Honda. Modified signal-to-noise: a new simple and practical gene filtering approach based on the concept of projective adaptive resonance theory (PART) filtering method
1665 -- 1667Fei Pan, Kiran Kamath, Kangyu Zhang, Sudip Pulapura, Avinash Achar, Juan Nunez-Iglesias, Yu Huang 0003, Xifeng Yan, Jiawei Han, Haiyan Hu, Min Xu, Jianjun Hu, Xianghong Jasmine Zhou. Integrative Array Analyzer: a software package for analysis of cross-platform and cross-species microarray data
1668 -- 1669X. Yuan, Zhang-Zhi Hu, H. T. Wu, Manabu Torii, Meenakshi Narayanaswamy, K. E. Ravikumar, K. Vijay-Shanker, Cathy H. Wu. An online literature mining tool for protein phosphorylation
1670 -- 1673Justin Klekota, Frederick P. Roth, Stuart L. Schreiber. Query Chem: a Google-powered web search combining text and chemical structures
1674 -- 0Amanda Clare, Andreas Karwath, Helen Ougham, Ross D. King. Functional bioinformatics for ::::Arabidopsis thaliana::::