Journal: Bioinformatics

Volume 22, Issue 3

257 -- 263Lakshminarayan M. Iyer, A. Maxwell Burroughs, L. Aravind. The ASCH superfamily: novel domains with a fold related to the PUA domain and a potential role in RNA metabolism
264 -- 268Matthew H. J. Cordes, Greta J. Binford. Lateral gene transfer of a dermonecrotic toxin between spiders and bacteria
269 -- 277Núria López-Bigas, Benjamin J. Blencowe, Christos A. Ouzounis. Highly consistent patterns for inherited human diseases at the molecular level
278 -- 284Susan Idicula-Thomas, Abhijit J. Kulkarni, Bhaskar D. Kulkarni, Valadi K. Jayaraman, Petety V. Balaji. A support vector machine-based method for predicting the propensity of a protein to be soluble or to form inclusion body on overexpression in ::::Escherichia coli::::
285 -- 290Qiwen Dong, Xiaolong Wang, Lei Lin. Application of latent semantic analysis to protein remote homology detection
291 -- 296S. Vishnu V. Deevi, Andrew C. R. Martin. An extensible automated protein annotation tool: standardizing input and output using validated XML
297 -- 302Eunhee Koh, Taehyo Kim, Hyun-soo Cho. Mean curvature as a major determinant of ß-sheet propensity
303 -- 309Baoqiang Cao, Aleksey A. Porollo, Rafal Adamczak, Mark Jarrell, Jaroslaw Meller. Enhanced recognition of protein transmembrane domains with prediction-based structural profiles
310 -- 316Earl F. Glynn, Jie Chen, Arcady R. Mushegian. Detecting periodic patterns in unevenly spaced gene expression time series using Lomb-Scargle periodograms
317 -- 325Wensheng Zhang, Romdhane Rekaya, Keith Bertrand. A method for predicting disease subtypes in presence of misclassification among training samples using gene expression: application to human breast cancer
326 -- 331Dick de Ridder, Frank J. T. Staal, Jacques J. M. van Dongen, Marcel J. T. Reinders. Maximum significance clustering of oligonucleotide microarrays
332 -- 340Jianhua Ruan, Weixiong Zhang. A bi-dimensional regression tree approach to the modeling of gene expression regulation
341 -- 345Peter Beerli. Comparison of Bayesian and maximum-likelihood inference of population genetic parameters
346 -- 353Ravishankar Rao Vallabhajosyula, Vijay Chickarmane, Herbert M. Sauro. Conservation analysis of large biochemical networks
354 -- 355Mark W. E. J. Fiers, Huub van de Wetering, Tim H. J. M. Peeters, Jarke J. van Wijk, Jan Peter Nap. DNAVis: interactive visualization of comparative genome annotations
356 -- 358A. V. McDonnell, T. Jiang, A. E. Keating, B. Berger. Paircoil2: improved prediction of coiled coils from sequence
359 -- 360Tobias Dezulian, Michael Remmert, Javier F. Palatnik, Detlef Weigel, Daniel H. Huson. Identification of plant microRNA homologs
361 -- 362Tiago José P. Sobreira, Alan M. Durham, Arthur Gruber. TRAP: automated classification, quantification and annotation of tandemly repeated sequences
363 -- 364Nicolas Bortolussi, Eric Durand, Michael Blum, Olivier François. apTreeshape: statistical analysis of phylogenetic tree shape
365 -- 366Andreas Moll, Andreas Hildebrandt, Hans-Peter Lenhof, Oliver Kohlbacher. BALLView: a tool for research and education in molecular modeling
367 -- 368Elo Leung, Pierre R. Bushel. PAGE: phase-shifted analysis of gene expression
369 -- 370Giorgio Valentini. Clusterv: a tool for assessing the reliability of clusters discovered in DNA microarray data
371 -- 373Dumitru Brinza, Alexander Zelikovsky. 2SNP: scalable phasing based on 2-SNP haplotypes
374 -- 375Ugur Dogrusöz, E. Z. Erson, Erhan Giral, Emek Demir, Ozgun Babur, Ahmet Cetintas, R. Colak. Patika::::web::::: a Web interface for analyzing biological pathways through advanced querying and visualization
376 -- 377Hu Chen, Ni Huang, Zhirong Sun. SubLoc: a server/client suite for protein subcellular location based on SOAP
378 -- 380Jing Ding, Laron M. Hughes, Daniel Berleant, Andy W. Fulmer, Eve Syrkin Wurtele. PubMed Assistant: a biologist-friendly interface for enhanced PubMed search
381 -- 383Steven M. Gallo, Long Li, Zihua Hu, Marc S. Halfon. ::::REDfly: :::: a Regulatory Element Database for ::::Drosophila::::