| 905 | -- | 910 | A. M. Quirke, F. Jerry Reen, Marcus J. Claesson, E. Fidelma Boyd. Genomic island identification in ::::Vibrio vulnificus:::: reveals significant genome plasticity in this human pathogen |
| 911 | -- | 918 | Philippe Broët, Sylvia Richardson. Detection of gene copy number changes in CGH microarrays using a spatially correlated mixture model |
| 919 | -- | 923 | Hao Xiong. Non-linear tests for identifying differentially expressed genes or genetic networks |
| 924 | -- | 933 | Benjamin R. Jefferys, Lawrence A. Kelley, Marek J. Sergot, John Fox, Michael J. E. Sternberg. Capturing expert knowledge with argumentation: a case study in bioinformatics |
| 934 | -- | 942 | Kay C. Wiese, Andrew Hendriks. Comparison of ::::P-RnaPredict:::: and ::::mfold:::: - algorithms for RNA secondary structure prediction |
| 943 | -- | 949 | Sepp Hochreiter, Djork-Arné Clevert, Klaus Obermayer. A new summarization method for affymetrix probe level data |
| 950 | -- | 958 | Ja-Yong Koo, Insuk Sohn, Sujong Kim, Jae-Won Lee. Structured polychotomous machine diagnosis of multiple cancer types using gene expression |
| 959 | -- | 966 | Peng Qiu, Z. Jane Wang, K. J. Ray Liu. Polynomial model approach for resynchronization analysis of cell-cycle gene expression data |
| 967 | -- | 973 | Xiang Guo, Rongxiang Liu, Craig D. Shriver, Hai Hu, Michael N. Liebman. Assessing semantic similarity measures for the characterization of human regulatory pathways |
| 974 | -- | 980 | Natasa Przulj, Derek G. Corneil, Igor Jurisica. Efficient estimation of graphlet frequency distributions in protein-protein interaction networks |
| 981 | -- | 988 | Claudia Plant, Christian Böhm, Bernhard Tilg, Christian Baumgartner. Enhancing instance-based classification with local density: a new algorithm for classifying unbalanced biomedical data |
| 989 | -- | 996 | Haiquan Li, Jinyan Li, Limsoon Wong. Discovering motif pairs at interaction sites from protein sequences on a proteome-wide scale |
| 997 | -- | 998 | Philipp Pagel, Matthias Oesterheld, Volker Stümpflen, Dmitrij Frishman. The DIMA web resource - exploring the protein domain network |
| 999 | -- | 1001 | Voichita D. Marinescu, Isaac S. Kohane, Tae-Kyung Kim, David A. Harmin, Michael E. Greenberg, Alberto Riva. START: an automated tool for serial analysis of chromatin occupancy data |
| 1002 | -- | 1003 | Martin Eisenacher, Jürgen de Braaf, Simone König. Mass Analysis Peptide Sequence Prediction (MAPSP) |
| 1004 | -- | 1006 | Michael J. Sanderson. ::::Paloverde::::: an OpenGL 3D phylogeny browser |
| 1007 | -- | 1009 | Surjit B. Dixit, David L. Beveridge. Structural bioinformatics of DNA: a web-based tool for the analysis of molecular dynamics results and structure prediction |
| 1010 | -- | 1012 | Janko Dietzsch, Nils Gehlenborg, Kay Nieselt. Mayday-a microarray data analysis workbench |
| 1013 | -- | 1014 | Jing Hua Zhao. Pedigree-drawing with R and graphviz |
| 1015 | -- | 1017 | Ramon Aragues, Daniel Jaeggi, Baldo Oliva. PIANA: protein interactions and network analysis |
| 1018 | -- | 1020 | Maria J. Schilstra, Lu Li, Joanne Matthews, Andrew Finney, Michael Hucka, Nicolas Le Novère. CellML2SBML: conversion of CellML into SBML |
| 1021 | -- | 1023 | Balázs Adamcsek, Gergely Palla, Illés J. Farkas, Imre Derényi, Tamás Vicsek. CFinder: locating cliques and overlapping modules in biological networks |
| 1024 | -- | 1026 | Adam Ameur, Vladimir Yankovski, Stefan Enroth, Ola Spjuth, Henryk Jan Komorowski. The LCB Data Warehouse |
| 1027 | -- | 1028 | Yongliang Ren, Wuming Gong, Qiqi Xu, Xin Zheng, Dong Lin, Yejun Wang, Tongbin Li. siRecords: an extensive database of mammalian siRNAs with efficacy ratings |
| 1029 | -- | 0 | Baolin Wu. Differential gene expression detection and sample classification using penalized linear regression models |