| 3113 | -- | 3118 | Matthew N. Davies, Andrew Secker, Alex Alves Freitas, Miguel Mendao, Jonathan Timmis, Darren R. Flower. On the hierarchical classification of G protein-coupled receptors |
| 3119 | -- | 3124 | Damien M. de Vienne, Tatiana Giraud, Olivier C. Martin. A congruence index for testing topological similarity between trees |
| 3125 | -- | 3130 | Mehdi Poursheikhali Asgary, Samad Jahandideh, Parviz Abdolmaleki, Anoshirvan Kazemnejad. Analysis and identification of beta-turn types using multinomial logistic regression and artificial neural network |
| 3131 | -- | 3138 | Francisco S. Domingues, Jörg Rahnenführer, Thomas Lengauer. Conformational analysis of alternative protein structures |
| 3139 | -- | 3146 | Ingolf Sommer, Oliver Müller, Francisco S. Domingues, Oliver Sander, Joachim Weickert, Thomas Lengauer. Moment invariants as shape recognition technique for comparing protein binding sites |
| 3147 | -- | 3154 | Jiangning Song, Zheng Yuan, Hao Tan, Thomas Huber, Kevin Burrage. Predicting disulfide connectivity from protein sequence using multiple sequence feature vectors and secondary structure |
| 3155 | -- | 3161 | Majid Masso, Iosif I. Vaisman. Accurate prediction of enzyme mutant activity based on a multibody statistical potential |
| 3162 | -- | 3169 | Gabriela V. Cohen Freue, Zsuzsanna Hollander, Enqing Shen, Ruben H. Zamar, Robert Balshaw, Andreas Scherer, Bruce McManus, Paul Keown, W. Robert McMaster, Raymond T. Ng. MDQC: a new quality assessment method for microarrays based on quality control reports |
| 3170 | -- | 3177 | Feng Tai, Wei Pan. Incorporating prior knowledge of gene functional groups into regularized discriminant analysis of microarray data |
| 3178 | -- | 3184 | K. Hao. Genome-wide selection of tag SNPs using multiple-marker correlation |
| 3185 | -- | 3192 | Thomas Fournier, Jean-Pierre Gabriel, Christian Mazza, Jerome Pasquier, Jose L. Galbete, Nicolas Mermod. Steady-state expression of self-regulated genes |
| 3193 | -- | 3199 | Fangping Mu, Robert F. Williams, Clifford J. Unkefer, Pat J. Unkefer, James R. Faeder, William S. Hlavacek. Carbon-fate maps for metabolic reactions |
| 3200 | -- | 3208 | Niels Grabe, Thora Pommerencke, Thorsten Steinberg, Hartmut Dickhaus, Pascal Tomakidi. Reconstructing protein networks of epithelial differentiation from histological sections |
| 3209 | -- | 3216 | Minh Quach, Nicolas Brunel, Florence d Alché-Buc. Estimating parameters and hidden variables in non-linear state-space models based on ODEs for biological networks inference |
| 3217 | -- | 3224 | Hyunjung Shin, Andreas Martin Lisewski, Olivier Lichtarge. Graph sharpening plus graph integration: a synergy that improves protein functional classification |
| 3225 | -- | 3231 | Dougu Nam, Sung Ho Yoon, Jihyun F. Kim. Ensemble learning of genetic networks from time-series expression data |
| 3232 | -- | 3240 | Colleen E. Crangle, J. Michael Cherry, Eurie L. Hong, Alex Zbyslaw. Mining experimental evidence of molecular function claims from the literature |
| 3241 | -- | 3243 | Lawrence J. K. Wee, Tin Wee Tan, Shoba Ranganathan. CASVM: web server for SVM-based prediction of caspase substrates cleavage sites |
| 3244 | -- | 3246 | Itay Mayrose, Osnat Penn, Elana Erez, Nimrod D. Rubinstein, Tomer Shlomi, Natalia Tarnovitski Freund, Erez M. Bublil, Eytan Ruppin, Roded Sharan, Jonathan M. Gershoni, Eric Martz, Tal Pupko. Pepitope: epitope mapping from affinity-selected peptides |
| 3247 | -- | 3248 | Sergei Spirin, Mikhail Titov, Anna Karyagina, Andrei Alexeevski. NPIDB: a Database of Nucleic Acids-Protein Interactions |
| 3249 | -- | 3250 | Hailong Meng, Arunava Banerjee, Lei Zhou. BLISS 2.0: a web-based tool for predicting conserved regulatory modules in distantly-related orthologous sequences |
| 3251 | -- | 3253 | Aravind Subramanian, Heidi Kuehn, Joshua Gould, Pablo Tamayo, Jill P. Mesirov. ::::GSEA-P::::: a desktop application for Gene Set Enrichment Analysis |
| 3254 | -- | 3255 | Zongli Xu, Norman L. Kaplan, Jack A. Taylor. TAGster: efficient selection of LD tag SNPs in single or multiple populations |
| 3256 | -- | 3257 | José Luis López-Pérez, Roberto Therón, Esther del Olmo, David Díaz. NAPROC-13: a database for the dereplication of natural product mixtures in bioassay-guided protocols |
| 3258 | -- | 3262 | Robert K. Bradley, Ian Holmes. Transducers: an emerging probabilistic framework for modeling indels on trees |
| 3263 | -- | 3264 | Ian Holmes. Phylocomposer and phylodirector: analysis and visualization of transducer indel models |