| 2223 | -- | 2230 | Nicola D. Roberts, R. Daniel Kortschak, Wendy T. Parker, Andreas W. Schreiber, Susan Branford, Hamish S. Scott, Garique Glonek, David L. Adelson. A comparative analysis of algorithms for somatic SNV detection in cancer |
| 2231 | -- | 2237 | William K. M. Lai, Michael J. Buck. An integrative approach to understanding the combinatorial histone code at functional elements |
| 2238 | -- | 2244 | David Tamborero, Abel Gonzalez-Perez, Nuria Lopez-Bigas. OncodriveCLUST: exploiting the positional clustering of somatic mutations to identify cancer genes |
| 2245 | -- | 2252 | Wen-Yun Yang, Farhad Hormozdiari, Zhanyong Wang, Dan He, Bogdan Pasaniuc, Eleazar Eskin. Leveraging reads that span multiple single nucleotide polymorphisms for haplotype inference from sequencing data |
| 2253 | -- | 2260 | Sasha Ames, David A. Hysom, Shea N. Gardner, G. Scott Lloyd, Maya B. Gokhale, Jonathan E. Allen. Scalable metagenomic taxonomy classification using a reference genome database |
| 2261 | -- | 2268 | Qin Ma, Bingqiang Liu, Chuan Zhou, Yanbin Yin, Guojun Li, Ying Xu. cis-regulatory motifs at a genome scale |
| 2269 | -- | 2276 | Juan Wang, Maozu Guo, Xiaoyan Liu, Yang Liu, Chun-yu Wang, Linlin Xing, Kai Che. Lnetwork: an efficient and effective method for constructing phylogenetic networks |
| 2277 | -- | 2284 | Md. Shamsuzzoha Bayzid, Tandy Warnow. Naive binning improves phylogenomic analyses |
| 2285 | -- | 2291 | Pier Paolo Olimpieri, Anna Chailyan, Anna Tramontano, Paolo Marcatili. Prediction of site-specific interactions in antibody-antigen complexes: the proABC method and server |
| 2292 | -- | 2299 | Naoki Nariai, Osamu Hirose, Kaname Kojima, Masao Nagasaki. TIGAR: transcript isoform abundance estimation method with gapped alignment of RNA-Seq data by variational Bayesian inference |
| 2300 | -- | 2310 | Laura H. LeGault, Colin N. Dewey. Inference of alternative splicing from RNA-Seq data with probabilistic splice graphs |
| 2311 | -- | 2319 | Gabriele Lillacci, Mustafa Khammash. The signal within the noise: efficient inference of stochastic gene regulation models using fluorescence histograms and stochastic simulations |
| 2320 | -- | 2326 | Carito Guziolowski, Santiago Videla, Federica Eduati, Sven Thiele, Thomas Cokelaer, Anne Siegel, Julio Saez-Rodriguez. Exhaustively characterizing feasible logic models of a signaling network using Answer Set Programming |
| 2327 | -- | 2334 | Elisenda Feliu, Carsten Wiuf. A computational method to preclude multistationarity in networks of interacting species |
| 2335 | -- | 2342 | Theodore Alexandrov, Andreas Bartels. Testing for presence of known and unknown molecules in imaging mass spectrometry |
| 2343 | -- | 2349 | Luís Pedro Coelho, Joshua Kangas, Armaghan W. Naik, Elvira Osuna-Highley, Estelle Glory-Afshar, Margaret Fuhrman, Ramanuja Simha, Peter B. Berget, Jonathan W. Jarvik, Robert F. Murphy. Determining the subcellular location of new proteins from microscope images using local features |
| 2350 | -- | 2352 | Joanna L. Sharman, Dietlind L. Gerloff. MaGnET: Malaria Genome Exploration Tool |
| 2353 | -- | 2354 | Susan K. Rathe, James E. Johnson, Kevin A. T. Silverstein, Jesse J. Erdmann, Adrienne L. Watson, Flavia E. Popescu, John R. Ohlfest, David A. Largaespada. MMuFLR: missense mutation and frameshift location reporter |
| 2355 | -- | 2356 | Hernán F. Morales, Guillermo Giovambattista. BioSmalltalk: a pure object system and library for bioinformatics |
| 2357 | -- | 2359 | Wenkang Huang, Shaoyong Lu, Zhimin Huang, Xinyi Liu, Linkai Mou, Yu Luo, Yanlong Zhao, Yaqin Liu, Zhongjie Chen, Tingjun Hou, Jian Zhang. Allosite: a method for predicting allosteric sites |
| 2360 | -- | 2362 | Joan Planas-Iglesias, Manuel A. Marin-Lopez, Jaume Bonet, Javier Garcia-Garcia, Baldo Oliva. iLoops: a protein-protein interaction prediction server based on structural features |
| 2363 | -- | 2364 | Víctor A. Gil, Victor Guallar. pyRMSD: a Python package for efficient pairwise RMSD matrix calculation and handling |
| 2365 | -- | 2368 | Nicolas De Jay, Simon Papillon-Cavanagh, Catharina Olsen, Nehme Hachem, Gianluca Bontempi, Benjamin Haibe-Kains. mRMRe: an R package for parallelized mRMR ensemble feature selection |
| 2369 | -- | 2370 | Wesley Schaal, Ulf Hammerling, Mats G. Gustafsson, Ola Spjuth. Automated QuantMap for rapid quantitative molecular network topology analysis |