| 2693 | -- | 2701 | Zi Wang, Edward Curry, Giovanni Montana. Network-guided regression for detecting associations between DNA methylation and gene expression |
| 2702 | -- | 2708 | Javier Pérez-Rodríguez, Alexis G. Arroyo-Peña, Nicolás García-Pedrajas. Improving translation initiation site and stop codon recognition by using more than two classes |
| 2709 | -- | 2716 | Sagar M. Utturkar, Dawn M. Klingeman, Miriam L. Land, Christopher W. Schadt, Mitchel J. Doktycz, Dale A. Pelletier, Steven D. Brown. de novo and hybrid assembly techniques to derive high-quality genome sequences |
| 2717 | -- | 2722 | Bahlul Haider, Tae-Hyuk Ahn, Brian Bushnell, Juanjuan Chai, Alex Copeland, Chongle Pan. de novo Assembler for Metagenomics |
| 2723 | -- | 2732 | Paul Greenfield, Konsta Duesing, Alexie Papanicolaou, Denis C. Bauer. Blue: correcting sequencing errors using consensus and context |
| 2733 | -- | 2740 | Mario Abdel Messih, Rosalba Lepore, Paolo Marcatili, Anna Tramontano. Improving the accuracy of the structure prediction of the third hypervariable loop of the heavy chains of antibodies |
| 2741 | -- | 2746 | So Young Ryu, Wei-Jun Qian, David G. Camp II, Richard D. Smith, Ronald G. Tompkins, Ronald W. Davis, Wenzhong Xiao. Detecting differential protein expression in large-scale population proteomics |
| 2747 | -- | 2756 | Pashupati Mishra, Petri Törönen, Yrjö Leino, Liisa Holm. Gene set analysis: limitations in popular existing methods and proposed improvements |
| 2757 | -- | 2763 | Hilary S. Parker, Jeffrey T. Leek, Alexander V. Favorov, Michael Considine, Xiaoxin Xia, Sameer Chavan, Christine H. Chung, Elana J. Fertig. Preserving biological heterogeneity with a permuted surrogate variable analysis for genomics batch correction |
| 2764 | -- | 2771 | Rónán Daly, Simon Rogers, Joe Wandy, Andris Jankevics, Karl E. V. Burgess, Rainer Breitling. MetAssign: probabilistic annotation of metabolites from LC-MS data using a Bayesian clustering approach |
| 2772 | -- | 2778 | Fan Zhu, Yuanfang Guan. Predicting dynamic signaling network response under unseen perturbations |
| 2779 | -- | 2786 | Ying Wang, Christopher A. Penfold, David A. Hodgson, Miriam L. Gifford, Nigel J. Burroughs. Correcting for link loss in causal network inference caused by regulator interference |
| 2787 | -- | 2795 | Ameet Talwalkar, Jesse Liptrap, Julie Newcomb, Christopher Hartl, Jonathan Terhorst, Kristal Curtis, Ma'ayan Bresler, Yun S. Song, Michael I. Jordan, David A. Patterson. SMaSH: a benchmarking toolkit for human genome variant calling |
| 2796 | -- | 2801 | Lilian Janin, Ole Schulz-Trieglaff, Anthony J. Cox. BEETL-fastq: a searchable compressed archive for DNA reads |
| 2802 | -- | 2807 | Yinan Zheng, Zhe Fei, Wei Zhang, Justin B. Starren, Lei Liu, Andrea A. Baccarelli, Yi Li, Lifang Hou. PGS: a tool for association study of high-dimensional microRNA expression data with repeated measures |
| 2808 | -- | 2810 | Douglas H. Phanstiel, Alan P. Boyle, Carlos L. Araya, Michael P. Snyder. Sushi.R: flexible, quantitative and integrative genomic visualizations for publication-quality multi-panel figures |
| 2811 | -- | 2812 | Zuguang Gu, Lei Gu, Roland Eils, Matthias Schlesner, Benedikt Brors. circlize implements and enhances circular visualization in R |
| 2813 | -- | 2815 | Lisle E. Mose, Matthew D. Wilkerson, D. Neil Hayes, Charles M. Perou, Joel S. Parker. ABRA: improved coding indel detection via assembly-based realignment |
| 2816 | -- | 2817 | Simone Leo, Luca Pireddu, Gianmauro Cuccuru, Luca Lianas, Nicola Soranzo, Enis Afgan, Gianluigi Zanetti. BioBlend.objects: metacomputing with Galaxy |
| 2818 | -- | 2819 | James K. Bonfield. The Scramble conversion tool |
| 2820 | -- | 2821 | Yongkyu Kim, Werner Liesack. DAFGA: diversity analysis of functional gene amplicons |
| 2822 | -- | 2825 | Dariusz Mrozek, Bozena Malysiak-Mrozek, Artur Klapcinski. Cloud4Psi: cloud computing for 3D protein structure similarity searching |
| 2826 | -- | 2827 | Jihoon Kim, Eric Levy, Alex Ferbrache, Petra Stepanowsky, Claudiu Farcas, Shuang Wang, Stefan Brunner, Tyler Bath, Yuan Wu, Lucila Ohno-Machado. MAGI: a Node.js web service for fast microRNA-Seq analysis in a GPU infrastructure |
| 2828 | -- | 2829 | Shuang Feng, Dajiang Liu, Xiaowei Zhan, Mary Kate Wing, Gonçalo R. Abecasis. RAREMETAL: fast and powerful meta-analysis for rare variants |
| 2830 | -- | 2831 | Max Flöttmann, Jannis Uhlendorf, Till Scharp, Edda Klipp, Thomas W. Spiesser. SensA: web-based sensitivity analysis of SBML models |
| 2832 | -- | 2833 | Gerard Wong, Jeffrey Chan, Bronwyn A. Kingwell, Christopher Leckie, Peter J. Meikle. LICRE: unsupervised feature correlation reduction for lipidomics |
| 2834 | -- | 2836 | Shailesh Tripathi, Matthias Dehmer, Frank Emmert-Streib. NetBioV: an R package for visualizing large network data in biology and medicine |
| 2837 | -- | 2839 | Jikai Lei, Yanni Sun. miR-PREFeR: an accurate, fast and easy-to-use plant miRNA prediction tool using small RNA-Seq data |
| 2840 | -- | 2842 | Hoifung Poon, Chris Quirk, Charlie DeZiel, David Heckerman. Literome: PubMed-scale genomic knowledge base in the cloud |