| 2921 | -- | 2929 | Yao Lu, Yulan Lu, Jingyuan Deng, Hai Peng, Hui Lu, Long Jason Lu. A novel essential domain perspective for exploring gene essentiality |
| 2930 | -- | 2938 | Sofia Morfopoulou, Vincent Plagnol. Bayesian mixture analysis for metagenomic community profiling |
| 2939 | -- | 2946 | Raffaele Giancarlo, Simona E. Rombo, Filippo Utro. in vivo nucleosome positioning |
| 2947 | -- | 2954 | Roland Wittler, Tobias Marschall, Alexander Schönhuth, Veli Mäkinen. Repeat- and error-aware comparison of deletions |
| 2955 | -- | 2962 | Song Yan, Shuai Yuan, Zheng Xu, Baqun Zhang, Bo Zhang, Guolian Kang, Andrea Byrnes, Yun Li. Likelihood-based complex trait association testing for arbitrary depth sequencing data |
| 2963 | -- | 2971 | Léon Kuchenbecker, Mikalai Nienen, Jochen Hecht, Avidan U. Neumann, Nina Babel, Knut Reinert, Peter N. Robinson. IMSEQ - a fast and error aware approach to immunogenetic sequence analysis |
| 2972 | -- | 2980 | Stefano Lonardi, Hamid Mirebrahim, Steve Wanamaker, Matthew Alpert, Gianfranco Ciardo, Denisa Duma, Timothy J. Close. de novo assembly quality |
| 2981 | -- | 2988 | Piotr Klukowski, Michal J. Walczak, Adam Gonczarek, Julien Boudet, Gerhard Wider. Computer vision-based automated peak picking applied to protein NMR spectra |
| 2989 | -- | 2998 | Laleh Haghverdi, Florian Buettner, Fabian J. Theis. Diffusion maps for high-dimensional single-cell analysis of differentiation data |
| 2999 | -- | 3007 | David Henriques, Miguel Rocha, Julio Saez-Rodriguez, Julio R. Banga. Reverse engineering of logic-based differential equation models using a mixed-integer dynamic optimization approach |
| 3008 | -- | 3015 | Lujia Chen, Chunhui Cai, Vicky Chen, Xinghua Lu. Trans-species learning of cellular signaling systems with bimodal deep belief networks |
| 3016 | -- | 3026 | Daniele Ramazzotti, Giulio Caravagna, Loes Olde Loohuis, Alex Graudenzi, Ilya Korsunsky, Giancarlo Mauri, Marco Antoniotti, Bud Mishra. CAPRI: efficient inference of cancer progression models from cross-sectional data |
| 3027 | -- | 3034 | David E. Robillard, Phelelani T. Mpangase, Scott Hazelhurst, Frank Dehne. SpeeDB: fast structural protein searches |
| 3035 | -- | 3042 | Wallace K. B. Chan, Hongjiu Zhang, Jianyi Yang, Jeffrey R. Brender, Junguk Hur, Arzucan Özgür, Yang Zhang. GLASS: a comprehensive database for experimentally validated GPCR-ligand associations |
| 3043 | -- | 3045 | Bin Wang, John M. Cunningham, Xinan Holly Yang. Seq2pathway: an R/Bioconductor package for pathway analysis of next-generation sequencing data |
| 3046 | -- | 3047 | Kazumitsu Maehara, Yasuyuki Ohkawa. agplus: a rapid and flexible tool for aggregation plots |
| 3048 | -- | 3050 | Xinyi Shi, Jing Peng, Xiaohan Yu, Xiaohong Zhang, Dongye Li, Baohui Liu, Fanjiang Kong, Xiaohui Yuan. PopGeV: a web-based large-scale population genome browser |
| 3051 | -- | 3053 | Elke Schaper, Alexander Korsunsky, Julija Pecerska, Antonio Messina, Riccardo Murri, Heinz Stockinger, Stefan Zoller, Ioannis Xenarios, Maria Anisimova. TRAL: tandem repeat annotation library |
| 3054 | -- | 3056 | Antoine Chambaz, Pierre Neuvial. tmle.npvi: targeted, integrative search of associations between DNA copy number and gene expression, accounting for DNA methylation |
| 3057 | -- | 3059 | Swneke D. Bailey, Carl Virtanen, Benjamin Haibe-Kains, Mathieu Lupien. ABC: a tool to identify SNVs causing allele-specific transcription factor binding from ChIP-Seq experiments |
| 3060 | -- | 3062 | Gregory W. Gundersen, Matthew R. Jones, Andrew D. Rouillard, Yan Kou, Caroline D. Monteiro, Axel S. Feldmann, Kevin S. Hu, Avi Ma'ayan. GEO2Enrichr: browser extension and server app to extract gene sets from GEO and analyze them for biological functions |
| 3063 | -- | 3065 | Ron Wehrens, Tom G. Bloemberg, Paul H. C. Eilers. Fast parametric time warping of peak lists |
| 3066 | -- | 3068 | Rémy Nicolle, François Radvanyi, Mohamed Elati. CoRegNet: reconstruction and integrated analysis of co-regulatory networks |
| 3069 | -- | 3071 | Minjae Yoo, Jimin Shin, Jihye Kim, Karen A. Ryall, Kyubum Lee, Sunwon Lee, Minji Jeon, Jaewoo Kang, Aik Choon Tan. DSigDB: drug signatures database for gene set analysis |
| 3072 | -- | 3074 | Astrid Wachter, Tim Beißbarth. pwOmics: an R package for pathway-based integration of time-series omics data using public database knowledge |
| 3075 | -- | 3077 | Alba Gutierrez-Sacristán, Solène Grosdidier, Olga Valverde, Marta Torrens, Àlex Bravo, Janet Piñero, Ferran Sanz, Laura I. Furlong. PsyGeNET: a knowledge platform on psychiatric disorders and their genes |
| 3078 | -- | 3080 | Alex Hodgkins, Anna Farne, Sajith Perera, Tiago Grego, David J. Parry-Smith, William C. Skarnes, Vivek Iyer. WGE: a CRISPR database for genome engineering |