| 3401 | -- | 3405 | Naiqian Zhang, Hua-Jun Wu, Weiwei Zhang, Jun Wang, Hao Wu, Xiaoqi Zheng. Predicting tumor purity from methylation microarray data |
| 3406 | -- | 3412 | Abhishek Biswas, David Gauthier, Desh Ranjan, Mohammad Zubair. ISQuest: finding insertion sequences in prokaryotic sequence fragment data |
| 3413 | -- | 3420 | Min Jin Ha, Veerabhadran Baladandayuthapani, Kim-Anh Do. DINGO: differential network analysis in genomics |
| 3421 | -- | 3428 | Amin Allam, Panos Kalnis, Victor Solovyev. Karect: accurate correction of substitution, insertion and deletion errors for next-generation sequencing data |
| 3429 | -- | 3436 | Dan Ofer, Michal Linial. ProFET: Feature engineering captures high-level protein functions |
| 3437 | -- | 3444 | Thies Gehrmann, Marcel J. T. Reinders. Proteny: discovering and visualizing statistically significant syntenic clusters at the proteome level |
| 3445 | -- | 3450 | Jichen Yang, Stephen A. Ramsey. A DNA shape-based regulatory score improves position-weight matrix-based recognition of transcription factor binding sites |
| 3451 | -- | 3459 | Daniel K. Manter, Matthew G. Bakker. Estimating beta diversity for under-sampled communities using the variably weighted Odum dissimilarity index and OTUshuff |
| 3460 | -- | 3467 | Sayoni Das, David Lee, Ian Sillitoe, Natalie L. Dawson, Jonathan G. Lees, Christine A. Orengo. Functional classification of CATH superfamilies: a domain-based approach for protein function annotation |
| 3468 | -- | 3475 | Subrata Saha, Sanguthevar Rajasekaran. ERGC: an efficient referential genome compression algorithm |
| 3476 | -- | 3482 | Robert C. Edgar, Henrik Flyvbjerg. Error filtering, pair assembly and error correction for next-generation sequencing reads |
| 3483 | -- | 3491 | Guillaume Beauclair, Antoine Bridier-Nahmias, Jean-François Zagury, Ali Saïb, Alessia Zamborlini. JASSA: a comprehensive tool for prediction of SUMOylation sites and SIMs |
| 3492 | -- | 3498 | Bin Liu, Junjie Chen, Xiaolong Wang. Application of learning to rank to protein remote homology detection |
| 3499 | -- | 3505 | Michal J. Pietal, Janusz M. Bujnicki, Lukasz P. Kozlowski. GDFuzz3D: a method for protein 3D structure reconstruction from contact maps, based on a non-Euclidean distance function |
| 3506 | -- | 3513 | Jianzhu Ma, Sheng Wang, Zhiyong Wang, Jinbo Xu. Protein contact prediction by integrating joint evolutionary coupling analysis and supervised learning |
| 3514 | -- | 3521 | Huwenbo Shi, Bogdan Pasaniuc, Kenneth L. Lange. A multivariate Bernoulli model to predict DNaseI hypersensitivity status from haplotype data |
| 3522 | -- | 3528 | Michael Correll, Adam L. Bailey, Alper Sarikaya, David H. O'Connor, Michael Gleicher. LayerCake: a tool for the visual comparison of viral deep sequencing data |
| 3529 | -- | 3536 | Zixing Wang, Wenlong Xu, Yin Liu. Integrating full spectrum of sequence features into predicting functional microRNA-mRNA interactions |
| 3537 | -- | 3543 | Tyler Weirick, David John, Stefanie Dimmeler, Shizuka Uchida. C-It-Loci: a knowledge database for tissue-enriched loci |
| 3544 | -- | 3545 | Ilham A. Shahmuradov, Victor V. Solovyev. Nsite, NsiteH and NsiteM computer tools for studying transcription regulatory elements |
| 3546 | -- | 3548 | Richard A. Neher, Trevor Bedford. nextflu: real-time tracking of seasonal influenza virus evolution in humans |
| 3549 | -- | 3551 | Alex H. Stram, Paul Marjoram, Gary K. Chen. al3c: high-performance software for parameter inference using Approximate Bayesian Computation |
| 3552 | -- | 3554 | Andrei-Alin Popescu, Katharina T. Huber. PSIKO2: a fast and versatile tool to infer population stratification on various levels in GWAS |
| 3555 | -- | 3557 | Mitchell J. Machiela, Stephen J. Chanock. LDlink: a web-based application for exploring population-specific haplotype structure and linking correlated alleles of possible functional variants |
| 3558 | -- | 3560 | Andreas Raue, Bernhard Steiert, M. Schelker, Clemens Kreutz, Tim Maiwald, H. Hass, Joep Vanlier, C. Tönsing, L. Adlung, R. Engesser, Wolfgang Mader, T. Heinemann, Jan Hasenauer, Marcel Schilling, Thomas Höfer, Edda Klipp, Fabian J. Theis, Ursula Klingmüller, Birgit Schoeberl, Jens Timmer. Data2Dynamics: a modeling environment tailored to parameter estimation in dynamical systems |