Journal: Bioinformatics

Volume 36, Issue 24

5567 -- 5570Kyuto Sonehara, Yukinori Okada. Obelisc: an identical-by-descent mapping tool based on SNP streak
5571 -- 5581Gabriela Alejandra Merino, Jonathan Raad, Leandro A Bugnon, Cristian A. Yones, Laura Kamenetzky, Juan Claus, Federico Ariel, Diego H. Milone, Georgina Stegmayer. Novel SARS-CoV-2 encoded small RNAs in the passage to humans
5582 -- 5589Taedong Yun, Helen Li, Pi-Chuan Chang, Michael F. Lin, Andrew Carroll, Cory Y. McLean. Accurate, scalable cohort variant calls using DeepVariant and GLnexus
5590 -- 5599Matteo Chiara, Pietro Mandreoli, Marco Antonio Tangaro, Anna Maria D'Erchia, Sandro Sorrentino, Cinzia Forleo, David Stephen Horner, Federico Zambelli, Graziano Pesole. VINYL: Variant prIoritizatioN bY survivaL analysis
5600 -- 5609Zhibin Lv, Pingping Wang, Quan Zou 0001, Qinghua Jiang. Identification of sub-Golgi protein localization by use of deep representation learning features
5610 -- 5617Dipankar Ranjan Baisya, Stefano Lonardi. Prediction of histone post-translational modifications using deep learning
5618 -- 5622Joana Pereira, Andrei N. Lupas. The VCBS superfamily forms a third supercluster of β-propellers that includes tachylectin and integrins
5623 -- 5631Maryam Rabiee, Siavash Mirarab. SODA: multi-locus species delimitation using quartet frequencies
5632 -- 5639Matthew Kerin, Jonathan Marchini. A non-linear regression method for estimation of gene-environment heritability
5640 -- 5648Arunabha Majumdar, Kathryn S. Burch, Tanushree Haldar, Sriram Sankararaman, Bogdan Pasaniuc, W. James Gauderman, John S. Witte. A two-step approach to testing overall effect of gene-environment interaction for multiple phenotypes
5649 -- 5655Jingyi Cai, Tianwei Tan, Siu Hung Joshua Chan. Predicting Nash equilibria for microbial metabolic interactions
5656 -- 5664Chengqian Lu, Min Zeng, Fang-Xiang Wu, Min Li 0007, Jianxin Wang 0001. Improving circRNA-disease association prediction by sequence and ontology representations with convolutional and recurrent neural networks
5665 -- 5671Yuanjing Ma, Hongmei Jiang. NinimHMDA: neural integration of neighborhood information on a multiplex heterogeneous network for multiple types of human Microbe-Disease association
5672 -- 5677Lili Zhao. Deep neural networks for predicting restricted mean survival times
5678 -- 5685Po-Ting Lai, Zhiyong Lu. BERT-GT: cross-sentence n-ary relation extraction with BERT and Graph Transformer
5686 -- 5694Marne C. Hagemeijer, Annelotte M. Vonk, Nikhil T. Awatade, Iris A. L. Silva, Christian Tischer, Volker Hilsenstein, Jeffrey M. Beekman, Margarida D. Amaral, Hugo M. Botelho. An open-source high-content analysis workflow for CFTR function measurements using the forskolin-induced swelling assay
5695 -- 5697Taylor Jones, Samuel B. Day, Luke Myers, James E. Crowe Jr., Cinque S. Soto. ClonoMatch: a tool for identifying homologous immunoglobulin and T-cell receptor sequences in large databases
5698 -- 5700Georgios Iakovou, Mousa Alhazzazi, Steven Hayward, Stephen D. Laycock. DockIT: a tool for interactive molecular docking and molecular complex construction
5701 -- 5702Constantin Ahlmann-Eltze, Wolfgang Huber. glmGamPoi: fitting Gamma-Poisson generalized linear models on single cell count data
5703 -- 5705Astghik Sargsyan, Alpha Tom Kodamullil, Shounak Baksi, Johannes Darms, Sumit Madan, Stephan Gebel, Oliver Keminer, Geena Mariya Jose, Helena Balabin, Lauren Nicole Delong, Manfred Kohler, Marc Jacobs 0001, Martin Hofmann-Apitius. The COVID-19 Ontology
5706 -- 5708Nils Eling, Nicolas Damond, Tobias Hoch, Bernd Bodenmiller. cytomapper: an R/Bioconductor package for visualization of highly multiplexed imaging data
5709 -- 5711Silvia Benevenuta, Emidio Capriotti, Piero Fariselli. Calibrating variant-scoring methods for clinical decision making
5712 -- 5718Vasundra Touré, Steven Vercruysse, Marcio Luis Acencio, Ruth C. Lovering, Sandra E. Orchard, Glyn Bradley, Cristina Casals-Casas, Claudine Chaouiya, Noemi del-Toro, Åsmund Flobak, Pascale Gaudet, Henning Hermjakob, Charles Tapley Hoyt, Luana Licata, Astrid Lægreid, Christopher J. Mungall, Anne Niknejad, Simona Panni, Livia Perfetto, Pablo Porras, Dexter Pratt, Julio Saez-Rodriguez, Denis Thieffry, Paul D. Thomas, Dénes Türei, Martin Kuiper. The Minimum Information about a Molecular Interaction CAusal STatement (MI2CAST)