0 | -- | 0 | Jackson Callaghan, Colleen H. Xu, Jiwen Xin, Marco Alvarado Cano, Anders Riutta, Eric Zhou, Rohan Juneja, Yao Yao, Madhumita Narayan, Kristina Hanspers, Ayushi Agrawal, Alexander R. Pico, Chunlei Wu, Andrew I. Su. BioThings Explorer: a query engine for a federated knowledge graph of biomedical APIs |
0 | -- | 0 | Viktoria Schuster, Anders Krogh. The Deep Generative Decoder: MAP estimation of representations improves modelling of single-cell RNA data |
0 | -- | 0 | Sophie Wharrie, Zhiyu Yang, Vishnu Raj, Remo Monti, Rahul Gupta, Ying Wang, Alicia Martin, Luke J. O'Connor, Samuel Kaski, Pekka Marttinen, Pier Francesco Palamara, Christoph Lippert, Andrea Ganna. HAPNEST: efficient, large-scale generation and evaluation of synthetic datasets for genotypes and phenotypes |
0 | -- | 0 | Grzegorz Chojnowski, Rafal Zaborowski, Marcin Magnus, Sunandan Mukherjee, Janusz M. Bujnicki. RNA 3D structure modeling by fragment assembly with small-angle X-ray scattering restraints |
0 | -- | 0 | Kyle Smith, Cheng Ye, Yatish Turakhia. Tracking and curating putative SARS-CoV-2 recombinants with RIVET |
0 | -- | 0 | Anna Nadtochiy, Peter Luu, Scott E. Fraser, Thai V. Truong. VoDEx: a Python library for time annotation and management of volumetric functional imaging data |
0 | -- | 0 | Jonathan Klonowski, Qianqian Liang, Zeynep H. Coban Akdemir, Cecilia Lo, Dennis Kostka. aenmd: annotating escape from nonsense-mediated decay for transcripts with protein-truncating variants |
0 | -- | 0 | . Correction to: Online bias-aware disease module mining with ROBUST-Web |
0 | -- | 0 | Saifur R. Khan, Andreea Obersterescu, Erica P. Gunderson, Babak Razani, Michael B. Wheeler, Brian J. Cox. metGWAS 1.0: an R workflow for network-driven over-representation analysis between independent metabolomic and meta-genome-wide association studies |
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0 | -- | 0 | Bárbara Zita Peters Couto, Nicholas Robertson, Ellis Patrick, Shila Ghazanfar. MoleculeExperiment enables consistent infrastructure for molecule-resolved spatial omics data in bioconductor |
0 | -- | 0 | Yan Zhu, Lingling Zhao, Naifeng Wen, Junjie Wang 0005, Chunyu Wang. DataDTA: a multi-feature and dual-interaction aggregation framework for drug-target binding affinity prediction |
0 | -- | 0 | Yan Hu, Vipina Kuttichi Keloth, Kalpana Raja, Yong Chen, Hua Xu. Towards precise PICO extraction from abstracts of randomized controlled trials using a section-specific learning approach |
0 | -- | 0 | David Teschner, David Gomez-Zepeda, Arthur Declercq, Mateusz K. Lacki, Seymen Avci, Konstantin Bob, Ute Distler, Thomas Michna, Lennart Martens, Stefan Tenzer, Andreas Hildebrandt 0001. Ionmob: a Python package for prediction of peptide collisional cross-section values |
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0 | -- | 0 | Pin Lyu, Yijie Zhai, Taibo Li, Jiang Qian. CellAnn: a comprehensive, super-fast, and user-friendly single-cell annotation web server |
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0 | -- | 0 | Jeffrey M. Dick, Xun Kang. chem16S: community-level chemical metrics for exploring genomic adaptation to environments |
0 | -- | 0 | Wei Qu, Ronghui You, Hiroshi Mamitsuka, Shanfeng Zhu. DeepMHCI: an anchor position-aware deep interaction model for accurate MHC-I peptide binding affinity prediction |
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0 | -- | 0 | Gherard Batisti Biffignandi, Greta Bellinzona, Greta Petazzoni, Davide Sassera, Gianvincenzo Zuccotti, Claudio Bandi, Fausto Baldanti, Francesco Comandatore, Stefano Gaiarsa. P-DOR, an easy-to-use pipeline to reconstruct bacterial outbreaks using genomics |
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0 | -- | 0 | Matthew D. Smith 0004, Marshall A Case, Emily K. Makowski, Peter M. Tessier. Position-Specific Enrichment Ratio Matrix scores predict antibody variant properties from deep sequencing data |
0 | -- | 0 | Lechuan Li, Ruth Dannenfelser, Yu Zhu 0003, Nathaniel Hejduk, Santiago Segarra, Vicky Yao. Joint embedding of biological networks for cross-species functional alignment |
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0 | -- | 0 | . Correction to: Optimal adjustment sets for causal query estimation in partially observed biomolecular networks |
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0 | -- | 0 | . Correction to: "Retraction of: DeepCRISTL: deep transfer learning to predict CRISPR/Cas9 functional and endogenous on-target editing efficiency" |
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0 | -- | 0 | Yiwei Liu, Changhuo Yang, Hong-Dong Li, Jianxin Wang. IsoFrog: a reversible jump Markov Chain Monte Carlo feature selection-based method for predicting isoform functions |
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