| 1 | -- | 0 | Sheeba Samuel, Birgitta König-Ries. End-to-End provenance representation for the understandability and reproducibility of scientific experiments using a semantic approach |
| 2 | -- | 0 | Roberto Zanoli, Alberto Lavelli, Theresa Löffler, Nicolas Andres Perez Gonzalez, Fabio Rinaldi 0001. An annotated dataset for extracting gene-melanoma relations from scientific literature |
| 3 | -- | 0 | Bernd Müller, Leyla Jael Castro, Dietrich Rebholz-Schuhmann. Ontology-based identification and prioritization of candidate drugs for epilepsy from literature |
| 4 | -- | 0 | Max Schröder, Susanne Stählke, Paul Groth, J. Barbara Nebe, Sascha Spors, Frank Krüger 0001. Structure-based knowledge acquisition from electronic lab notebooks for research data provenance documentation |
| 5 | -- | 0 | Florent Baty, Jemima Hegermann, Tiziana Locatelli, Claudio Rüegg, Christian Gysin, Frank Rassouli, Martin Brutsche. Text mining-based measurement of precision of polysomnographic reports as basis for intervention |
| 6 | -- | 0 | Raphaël Gazzotti, Catherine Faron, Fabien Gandon, Virginie Lacroix-Hugues, David Darmon. Extending electronic medical records vector models with knowledge graphs to improve hospitalization prediction |
| 7 | -- | 0 | Nicholas Nicholson, Francesco Giusti, Manola Bettio, Raquel Negrao Carvalho, Nadya Dimitrova, Tadeusz Dyba, Manuela Flego, Luciana Neamtiu, Giorgia Randi, Carmen Martos. A multipurpose TNM stage ontology for cancer registries |
| 8 | -- | 0 | Amara Tariq, Omar Kallas, Patricia Balthazar, Scott Jeffery Lee, Terry Desser, Daniel Rubin, Judy Wawira Gichoya, Imon Banerjee. Transfer language space with similar domain adaptation: a case study with hepatocellular carcinoma |
| 9 | -- | 0 | Rajaram Kaliyaperumal, Mark D. Wilkinson, Pablo Alarcón Moreno, Nirupama Benis, Ronald Cornet, Bruna dos Santos Vieira, Michel Dumontier, César Henrique Bernabé, Annika Jacobsen, Clémence M. A. Le Cornec, Mario Prieto Godoy, Núria Queralt-Rosinach, Leo J. Schultze Kool, Morris A. Swertz, Philip van Damme, K. Joeri van der Velde, Nawel Lalout, Shuxin Zhang, Marco Roos. Semantic modelling of common data elements for rare disease registries, and a prototype workflow for their deployment over registry data |
| 10 | -- | 0 | Zhe Yang, Kun Jiang, Miaomiao Lou, Yang Gong, Lili Zhang, Jing Liu, Xinyu Bao, Danhong Liu, Peng Yang. Defining health data elements under the HL7 development framework for metadata management |
| 11 | -- | 0 | Marine Louarn, Fabrice Chatonnet, Xavier Garnier, Thierry Fest, Anne Siegel, Catherine Faron, Olivier Dameron. Improving reusability along the data life cycle: a regulatory circuits case study |
| 12 | -- | 0 | Núria Queralt-Rosinach, Rajaram Kaliyaperumal, César Henrique Bernabé, Qinqin Long, Simone A. Joosten, Henk Jan van der Wijk, Erik Flikkenschild, Kees Burger, Annika Jacobsen, Barend Mons, Marco Roos. Applying the FAIR principles to data in a hospital: challenges and opportunities in a pandemic |
| 13 | -- | 0 | Lucas Emanuel Silva e Oliveira, Ana Carolina Peters, Adalniza Moura Pucca da Silva, Caroline P. Gebeluca, Yohan Bonescki Gumiel, Lilian Mie Mukai Cintho, Deborah Ribeiro Carvalho, Sadid A. Hasan, Claudia Maria Cabral Moro. SemClinBr - a multi-institutional and multi-specialty semantically annotated corpus for Portuguese clinical NLP tasks |
| 14 | -- | 0 | Olivia Sanchez-Graillet, Christian Witte, Frank Grimm, Philipp Cimiano. An annotated corpus of clinical trial publications supporting schema-based relational information extraction |
| 15 | -- | 0 | Hoang-Quynh Le, Duy-Cat Can, Nigel Collier. Exploiting document graphs for inter sentence relation extraction |
| 16 | -- | 0 | Olivia Sanchez-Graillet, Christian Witte, Frank Grimm, Steffen Grautoff, Basil Ell, Philipp Cimiano. Synthesizing evidence from clinical trials with dynamic interactive argument trees |
| 17 | -- | 0 | Samar Binkheder, Heng-Yi Wu, Sara K. Quinney, Shijun Zhang, Md. Muntasir Zitu, Chienwei Chiang, Lei Wang, Josette Jones, Lang Li. PhenoDEF: a corpus for annotating sentences with information of phenotype definitions in biomedical literature |
| 18 | -- | 0 | Lars Vogt, István Mikó, Thomas Bartolomaeus. Anatomy and the type concept in biology show that ontologies must be adapted to the diagnostic needs of research |
| 19 | -- | 0 | Philip van Damme, Jesualdo Tomás Fernández-Breis, Nirupama Benis, José Antonio Miñarro-Giménez, Nicolette F. de Keizer, Ronald Cornet. Performance assessment of ontology matching systems for FAIR data |
| 20 | -- | 0 | Samar Binkheder, Heng-Yi Wu, Sara K. Quinney, Shijun Zhang, Md. Muntasir Zitu, Chienwei Chiang, Lei Wang, Josette Jones, Lang Li 0001. Correction: PhenoDEF: a corpus for annotating sentences with information of phenotype definitions in biomedical literature |
| 21 | -- | 0 | João Cardoso 0002, Leyla Jael Castro, Fajar J. Ekaputra, Marie C. Jacquemot, Marek Suchánek, Tomasz Miksa, José Borbinha. DCSO: towards an ontology for machine-actionable data management plans |
| 22 | -- | 0 | Warren Manuel, Rashmie Abeysinghe, Yongqun He, Cui Tao, Licong Cui. Identification of missing hierarchical relations in the vaccine ontology using acquired term pairs |
| 23 | -- | 0 | John Grimes, Piotr Szul, Alejandro Metke-Jimenez, Michael Lawley, Kylynn Loi. Pathling: analytics on FHIR |
| 25 | -- | 0 | Yongqun He, Hong Yu 0014, Anthony Huffman, Asiyah Yu Lin, Darren A. Natale, John Beverley, Ling Zheng, Yehoshua Perl, Zhigang Wang, Yingtong Liu, Edison Ong, Yang Wang, Philip Huang, Long Tran, Jinyang Du, Zalan Shah, Easheta Shah, Roshan Desai, Hsin-Hui Huang, Yujia Tian, Eric Merrell, William D. Duncan, Sivaram Arabandi, Lynn M. Schriml, Jie Zheng, Anna Maria Masci, Liwei Wang 0010, Hongfang Liu, Fatima Zohra Smaili, Robert Hoehndorf, Zoë May Pendlington, Paola Roncaglia, Xianwei Ye, Jiangan Xie, Yi-Wei Tang, Xiaolin Yang, Suyuan Peng, Luxia Zhang, Luonan Chen, Junguk Hur, Gilbert S. Omenn, Brian D. Athey, Barry Smith 0001. A comprehensive update on CIDO: the community-based coronavirus infectious disease ontology |
| 26 | -- | 0 | Lisa Kühnel, Juliane Fluck. We are not ready yet: limitations of state-of-the-art disease named entity recognizers |