Journal: J. Biomedical Semantics

Volume 9, Issue 1

0 -- 0Junxiang Wang, Liang Zhao, Yanfang Ye, Yuji Zhang. Adverse event detection by integrating twitter data and VAERS
0 -- 0John Judkins, Jessica Tay-Sontheimer, Richard D. Boyce, Mathias Brochhausen. Extending the DIDEO ontology to include entities from the natural product drug interaction domain of discourse
0 -- 0Wytze J. Vlietstra, Rein Vos, Anneke M. Sijbers, Erik M. van Mulligen, Jan A. Kors. Using predicate and provenance information from a knowledge graph for drug efficacy screening
0 -- 0Joana M. Barros, Jim Duggan, Dietrich Rebholz-Schuhmann. Disease mentions in airport and hospital geolocations expose dominance of news events for disease concerns
0 -- 0David Osumi-Sutherland, Enrico Ponta, Mélanie Courtot, Helen E. Parkinson, Laura Badi. Using OWL reasoning to support the generation of novel gene sets for enrichment analysis
0 -- 0Mengyi Zhao, Songmao Zhang, Weizhuo Li, Guowei Chen. Matching biomedical ontologies based on formal concept analysis
0 -- 0Stefan Kropf, Alexandr Uciteli, Katrin Schierle, Peter Krücken, Kerstin Denecke, Heinrich Herre. Querying archetype-based EHRs by search ontology-based XPath engineering
0 -- 0Aurélie Névéol, Hercules Dalianis, Sumithra Velupillai, Guergana Savova, Pierre Zweigenbaum. Clinical Natural Language Processing in languages other than English: opportunities and challenges
0 -- 0Ying Shen, Daoyuan Chen, Buzhou Tang, Min Yang, Kai Lei. EAPB: entropy-aware path-based metric for ontology quality
0 -- 0Daniel Faria, Catia Pesquita, Isabela Mott, Catarina Martins, Francisco M. Couto, Isabel F. Cruz. Tackling the challenges of matching biomedical ontologies
0 -- 0Junguk Hur, Arzucan Özgür, Yongqun He. Ontology-based literature mining and class effect analysis of adverse drug reactions associated with neuropathy-inducing drugs
0 -- 0Nicolas Matentzoglu, James Malone, Chris Mungall, Robert Stevens. MIRO: guidelines for minimum information for the reporting of an ontology
0 -- 0Nagesh Panyam Chandrasekarasastry, Karin Verspoor, Trevor Cohn, Kotagiri Ramamohanarao. Exploiting graph kernels for high performance biomedical relation extraction
0 -- 0Elena Solovieva, Toshihide Shikanai, Noriaki Fujita, Hisashi Narimatsu. GGDonto ontology as a knowledge-base for genetic diseases and disorders of glycan metabolism and their causative genes
0 -- 0Shaker H. Ali El-Sappagh, Daehan Kwak, Farman Ali, Kyung Sup Kwak. DMTO: a realistic ontology for standard diabetes mellitus treatment
0 -- 0Viktor Senderov, Kiril Simov, Nico Franz, Pavel Stoev, Terry Catapano, Donat Agosti, Guido Sautter, Robert A. Morris 0002, Lyubomir Penev. OpenBiodiv-O: ontology of the OpenBiodiv knowledge management system
0 -- 0John David Osborne, Matthew B. Neu, Maria I. Danila, Thamar Solorio, Steven J. Bethard. CUILESS2016: a clinical corpus applying compositional normalization of text mentions
0 -- 0Mercedes Argüello Casteleiro, George Demetriou, Warren J. Read, Maria Jesus Fernandez Prieto, Nava Maroto, Diego Maseda-Fernandez, Goran Nenadic, Julie Klein 0002, John A. Keane, Robert Stevens. Deep learning meets ontologies: experiments to anchor the cardiovascular disease ontology in the biomedical literature
0 -- 0Thomas C. Rindflesch, Catherine Blake, Michael J. Cairelli, Marcelo Fiszman, Caroline J. Zeiss, Halil Kilicoglu. Investigating the role of interleukin-1 beta and glutamate in inflammatory bowel disease and epilepsy using discovery browsing
0 -- 0Daniela Oliveira, Catia Pesquita. Improving the interoperability of biomedical ontologies with compound alignments
0 -- 0Prodromos Kolyvakis, Alexandros Kalousis, Barry Smith 0001, Dimitris Kiritsis. Biomedical ontology alignment: an approach based on representation learning
0 -- 0Yongqun He, Zuoshuang Xiang, Jie Zheng, Yu Lin, James A. Overton, Edison Ong. The eXtensible ontology development (XOD) principles and tool implementation to support ontology interoperability
0 -- 0Alejandro Metke-Jimenez, Jim Steel, David P. Hansen, Michael Lawley. Ontoserver: a syndicated terminology server
0 -- 0Muhammad Amith, Cui Tao. Representing vaccine misinformation using ontologies
0 -- 0Asan Agibetov, Ernesto Jiménez-Ruiz, Marta Ondresik, Alessandro Solimando, Imon Banerjee, Giovanna Guerrini, Chiara Eva Catalano, Joaquim Miguel Oliveira, Giuseppe Patanè, Rui Luis Reis, Michela Spagnuolo. Supporting shared hypothesis testing in the biomedical domain