Journal: Genomics, Proteomics & Bioinformatics

Volume 21, Issue 2

243 -- 258Jian Li, Weicheng Liang, Zaozao Chen, Xingyu Li, Pan Gu, Anna Liu, Pin Chen, Qiwei Li, Xueyin Mei, Jing Yang, Jun Liu, Lincao Jiang, Zhongze Gu. OOCDB: A Comprehensive, Systematic, and Real-time Organs-on-a-chip Database
259 -- 266Jingcheng Wu, Wenfan Chen, Yuxuan Zhou, Ying Chi, Xian-Sheng Hua 0001, Jian Wu 0001, Xun Gu, Shu-Qing Chen, Zhan Zhou. TSNAdb v2.0: The Updated Version of Tumor-specific Neoantigen Database
267 -- 277Zexian Liu, Panqin Wang, Qingfeng Zhang, Shihua Li, Yuxin Zhang, Yutong Guo, Chongchong Jia, Tian Shao, Lin Li, Han Cheng, Zhenlong Wang. iHypoxia: An Integrative Database of Protein Expression Dynamics in Response to Hypoxia in Animals
278 -- 282Shunheng Zhou, Yu'e Huang, Jiani Xing, Xu Zhou, Sina Chen, Jiahao Chen, Lihong Wang, Wei Jiang 0023. ncFO: A Comprehensive Resource of Curated and Predicted ncRNAs Associated with Ferroptosis
283 -- 291Jianjian Wang, Shuang Li, Tianfeng Wang, Si Xu, Xu Wang, Xiaotong Kong, Xiaoyu Lu, Huixue Zhang, Lifang Li, Meng Feng, Shangwei Ning, Lihua Wang 0002. RNA2Immune: A Database of Experimentally Supported Data Linking Non-coding RNA Regulation to The Immune System
292 -- 299Tong Tang, Xingyun Liu, Rongrong Wu, Li Shen, Shumin Ren, Bairong Shen. CTRR-ncRNA: A Knowledgebase for Cancer Therapy Resistance and Recurrence Associated Non-coding RNAs
300 -- 310Ye Chen, Yuyan Wang, Ping Zhou, Hao Huang, Rui Li, Zhen Zeng, Zifeng Cui, Rui Tian, Zhuang Jin, Jiashuo Liu, Zhaoyue Huang, Lifang Li, Zheying Huang, Xun Tian, Meiying Yu, Zheng Hu. VIS Atlas: A Database of Virus Integration Sites in Human Genome from NGS Data to Explore Integration Patterns
311 -- 323Ke Ding, Shanwen Sun, Yang Luo, Chaoyue Long, Jingwen Zhai, Yixiao Zhai, Guohua Wang. PlantCADB: A Comprehensive Plant Chromatin Accessibility Database
324 -- 336Zhongqiu Li, Yiheng Hu, Xuelian Ma, Lingling Da, Jiajie She, Yue Liu, Xin Yi, Yaxin Cao, Wenying Xu, Yuannian Jiao, Zhen Su. WheatCENet: A Database for Comparative Co-expression Networks Analysis of Allohexaploid Wheat and Its Progenitors
337 -- 348ZhiHang Chen, Ziwei Luo, Di Zhang, Huiqin Li, Xuefei Liu, Kaiyu Zhu, Hongwan Zhang, Zongping Wang, Penghui Zhou, Jian Ren 0002, An Zhao, Zhixiang Zuo. TIGER: A Web Portal of Tumor Immunotherapy Gene Expression Resource
349 -- 358Shaojun Wang, Ronghui You, Yunjia Liu, Yi Xiong, Shanfeng Zhu. NetGO 3.0: Protein Language Model Improves Large-scale Functional Annotations
359 -- 369Yihe Pang, Bin Liu 0014. TransDFL: Identification of Disordered Flexible Linkers in Proteins by Transfer Learning
370 -- 384Guangsheng Pei, Fangfang Yan, Lukas M. Simon, Yulin Dai, Peilin Jia, Zhongming Zhao. deCS: A Tool for Systematic Cell Type Annotations of Single-cell RNA Sequencing Data among Human Tissues
385 -- 395Hao Lu, Luyu Ma, Cheng Quan, Lei Li, Yiming Lu, Gangqiao Zhou, Chenggang Zhang. RegVar: Tissue-specific Prioritization of Non-coding Regulatory Variants
396 -- 413Lei Du, Jin Zhang, Ying Zhao, Muheng Shang, Lei Guo 0002, Junwei Han. inMTSCCA: An Integrated Multi-task Sparse Canonical Correlation Analysis for Multi-omic Brain Imaging Genetics
414 -- 426Shi-Yuan Tong, Ke-fan, Zai-Wei Zhou, Lin-Yun Liu, Shu-Qing Zhang, Yinghui Fu, Guang-Zhong Wang, Ying Zhu, Yong-Chun Yu. mvPPT: A Highly Efficient and Sensitive Pathogenicity Prediction Tool for Missense Variants