Journal: J. Integrative Bioinformatics

Volume 14, Issue 4

0 -- 0Sérgio Matos, Rui Antunes. Protein-Protein Interaction Article Classification Using a Convolutional Recurrent Neural Network with Pre-trained Word Embeddings
0 -- 0Sara Cardoso, Marcelo Maraschin, Luiz Augusto Martins Peruch, Miguel Rocha, Aline Pereira. A Chemometrics Approach for Nuclear Magnetic Resonance Data to Characterize the Partial Metabolome Banana Peels from Southern Brazil
0 -- 0Rui Antunes, Sérgio Matos. Supervised Learning and Knowledge-Based Approaches Applied to Biomedical Word Sense Disambiguation
0 -- 0Gökhan Karakülah. Discovery and Annotation of Plant Endogenous Target Mimicry Sequences from Public Transcriptome Libraries: A Case Study of Prunus persica
0 -- 0João D. Ferreira, Bruno Inácio, Reza M. Salek, Francisco M. Couto. Assessing Public Metabolomics Metadata, Towards Improving Quality
0 -- 0Telma Afonso, Rodolfo Moresco, Virgílio G. Uarrota, Bruno Bachiega Navarro, Eduardo da C. Nunes, Marcelo Maraschin, Miguel Rocha. UV-Vis and CIELAB Based Chemometric Characterization of Manihot esculenta Carotenoid Contents
0 -- 0Shyamasree Ghosh. Application of Computational Methods in Planaria Research: A Current Update
0 -- 0Florentino Fdez-Riverola, Miguel Rocha. Selected Extended Papers of the 11th International Conference on Practical Applications of Computational Biology and Bioinformatics (PACBB)

Volume 14, Issue 3

0 -- 0Matiur Rahaman, Md. Asif Ahsan, Zeeshan Gillani, Ming Chen 0005. Digital Biomass Accumulation Using High-Throughput Plant Phenotype Data Analysis
0 -- 0Lijun Wang, Md. Asif Ahsan, Ming Chen 0005. A Generalized Approach for Measuring Relationships Among Genes
0 -- 0Vladimir N. Babenko, Dmitry A. Smagin, Natalia N. Kudryavtseva. RNA-Seq Mouse Brain Regions Expression Data Analysis: Focus on ApoE Functional Network
0 -- 0Jamie J. Alnasir, Hugh P. Shanahan. A Novel Method to Detect Bias in Short Read NGS Data
0 -- 0Vladimir N. Babenko, Natalya V. Gubanova, Anatoly O. Bragin, Irina V. Chadaeva, Gennady V. Vasiliev, Irina V. Medvedeva, Alexey S. Gaytan, Alexey L. Krivoshapkin, Yuriy L. Orlov. Computer Analysis of Glioma Transcriptome Profiling: Alternative Splicing Events
0 -- 0Ruiquan Ge, Guoqin Mai, Ruochi Zhang, Xundong Wu, Qing Wu, Fengfeng Zhou. MUSTv2: An Improved De Novo Detection Program for Recently Active Miniature Inverted Repeat Transposable Elements (MITEs)
0 -- 0Graeme Benstead-Hume, Sarah K. Wooller, Frances M. G. Pearl. Computational Approaches to Identify Genetic Interactions for Cancer Therapeutics
0 -- 0Ming Chen 0005, Andrew Harrison, Hugh P. Shanahan, Yuriy L. Orlov. Biological Big Bytes: Integrative Analysis of Large Biological Datasets

Volume 14, Issue 2

0 -- 0Markus List. Using Docker Compose for the Simple Deployment of an Integrated Drug Target Screening Platform
0 -- 0Dan Søndergaard, Svend V. Nielsen, Christian N. S. Pedersen, Søren Besenbacher. Prediction of Primary Tumors in Cancers of Unknown Primary
0 -- 0Jennifer K. Maier, Marianne Black, Serena Bonaretti, Bastian Bier, Bjoern Eskofier, Jang Hwan Choi, Marc Levenston, Garry Gold, Rebecca Fahrig, Andreas K. Maier. Comparison of Different Approaches for Measuring Tibial Cartilage Thickness
0 -- 0Eudes Barbosa, Richard Röttger, Anne-Christin Hauschild, Siomar de Castro Soares, Sebastian Böcker, Vasco Azevedo, Jan Baumbach. LifeStyle-Specific-Islands (LiSSI): Integrated Bioinformatics Platform for Genomic Island Analysis
0 -- 0Nora K. Speicher, Nico Pfeifer. Towards Multiple Kernel Principal Component Analysis for Integrative Analysis of Tumor Samples
0 -- 0Qihua Tan, Mads Thomassen, Mark Burton, Kristian Fredløv Mose, Klaus Ejner Andersen, Jacob v. B. Hjelmborg, Torben Arvid Kruse. Generalized Correlation Coefficient for Non-Parametric Analysis of Microarray Time-Course Data
0 -- 0Muserref Duygu Saçar Demirci, Jens Allmer. Improving the Quality of Positive Datasets for the Establishment of Machine Learning Models for pre-microRNA Detection
0 -- 0Simon J. Larsen, Jan Baumbach. CytoMCS: A Multiple Maximum Common Subgraph Detection Tool for Cytoscape
0 -- 0Maximilian Miller, Chengsheng Zhu, Yana Bromberg. clubber: removing the bioinformatics bottleneck in big data analyses
0 -- 0Sepideh Sadegh, Maryam Nazarieh, Christian Spaniol, Volkhard Helms. Randomization Strategies Affect Motif Significance Analysis in TF-miRNA-Gene Regulatory Networks
0 -- 0Noël Malod-Dognin, Natasa Przulj. Omics Data Complementarity Underlines Functional Cross-Communication in Yeast

Volume 14, Issue 1

0 -- 0Anindya Bhattacharya, Yan Cui. Systematic Prediction of the Impacts of Mutations in MicroRNA Seed Sequences
0 -- 0Hamid Hamzeiy, Rabia Suluyayla, Christoph Brinkrolf, Sebastian Jan Janowski, Ralf Hofestädt, Jens Allmer. Visualization and Analysis of MicroRNAs within KEGG Pathways using VANESA
0 -- 0Keywan Hassani-Pak, Christopher J. Rawlings. Knowledge Discovery in Biological Databases for Revealing Candidate Genes Linked to Complex Phenotypes
0 -- 0Kavita Goswami, Anita Tripathi, Neeti Sanan-Mishra. Comparative miRomics of Salt-Tolerant and Salt-Sensitive Rice
0 -- 0Ali M. Yazbeck, Kifah R. Tout, Peter F. Stadler, Jana Hertel. Towards a Consistent, Quantitative Evaluation of MicroRNA Evolution
0 -- 0Ralf Hofestädt, Falk Schreiber, Björn Sommer, Jens Allmer. Computational miRNomics - Integrative Approaches