Nico Pfeifer - researchr alias

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Viewing Publication 1 - 32 from 32

2023

Predicting functional effects of ion channel variants using new phenotypic machine learning methodsChristian Malte Boßelmann, Ulrike B. S. Hedrich, Holger Lerche, Nico Pfeifer. ploscb, 19(3), March 2023. [doi]

COmic: convolutional kernel networks for interpretable end-to-end learning on (multi-)omics dataJonas C. Ditz, Bernhard Reuter, Nico Pfeifer. bioinformatics, 39(Supplement-1):76-85, 2023. [doi]

Plasmodium falciparum protein antigen candidate predictionJonas C. Ditz, Jacqueline Wistuba-Hamprecht, Timo Maier, Rolf Fendel, Nico Pfeifer, Bernhard Reuter. bioinformatics, 39(Supplement-1):86-93, 2023. [doi]

Attentive Variational Information Bottleneck for TCR-peptide interaction predictionFilippo Grazioli, Pierre Machart, Anja Mösch, Kai Li, Leonardo V. Castorina, Nico Pfeifer, Martin Renqiang Min. bioinformatics, 39(1), January 2023. [doi]

Insights to HIV-1 coreceptor usage by estimating HLA adaptation with Bayesian generalized linear mixed modelsAnna Hake, Anja Germann, Corena de Beer, Alexander Thielen, Martin Däumer, Wolfgang Preiser, Hagen von Briesen, Nico Pfeifer. ploscb, 19(12), December 2023. [doi]

ppAURORA: Privacy Preserving Area Under Receiver Operating Characteristic and Precision-Recall CurvesAli Burak Ünal, Nico Pfeifer, Mete Akgün. NSS 2023: 265-280 [doi]

2022

Efficient privacy-preserving whole-genome variant queriesMete Akgün, Nico Pfeifer, Oliver Kohlbacher. bioinformatics, 38(8):2202-2210, 2022. [doi]

2021

Identifying disease-causing mutations with privacy protectionMete Akgün, Ali Burak Ünal, Bekir Ergüner, Nico Pfeifer, Oliver Kohlbacher. bioinformatics, 36(21):5205-5213, 2021. [doi]

ESCAPED: Efficient Secure and Private Dot Product Framework for Kernel-based Machine Learning Algorithms with Applications in HealthcareAli Burak Ünal, Mete Akgün, Nico Pfeifer. AAAI 2021: 9988-9996 [doi]

2020

Privacy Preserving Gaze Estimation using Synthetic Images via a Randomized Encoding Based FrameworkEfe Bozkir, Ali Burak Ünal, Mete Akgün, Enkelejda Kasneci, Nico Pfeifer. teletraffic 2020: [doi]

Privacy-preserving SVM on Outsourced Genomic Data via Secure Multi-party ComputationHuajie Chen, Ali Burak Ünal, Mete Akgün, Nico Pfeifer. codaspy 2020: 61-69 [doi]

2019

2018

2017

2015

Identification and analysis of methylation call differences between bisulfite microarray and bisulfite sequencing data with statistical learning techniquesMatthias Döring, Gilles Gasparoni, Jasmin Gries, Karl Nordström, Pavlo Lutsik, Jörn Walter, Nico Pfeifer. bmcbi, 16(S-3), 2015. [doi]

Integrating different data types by regularized unsupervised multiple kernel learning with application to cancer subtype discoveryNora K. Speicher, Nico Pfeifer. bioinformatics, 31(12):268-275, 2015. [doi]

2014

Interpretable Per Case Weighted Ensemble Method for Cancer AssociationsAdrin Jalali, Nico Pfeifer. wabi 2014: 352-353 [doi]

2012

Improving HIV coreceptor usage prediction in the clinic using hints from next-generation sequencing dataNico Pfeifer, Thomas Lengauer. bioinformatics, 28(18):589-595, 2012. [doi]

2009

Kernel-based machine learning on sequence data from proteomics and immunomicsNico Pfeifer. PhD thesis, Eberhard Karls University of Tübingen, 2009. [doi]

2008

2007

2005

TICO: a tool for improving predictions of prokaryotic translation initiation sitesMaike Tech, Nico Pfeifer, Burkhard Morgenstern, Peter Meinicke. bioinformatics, 21(17):3568-3569, 2005. [doi]

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